Variant report

Variant	rs239237
Chromosome Location	chr6:101094940-101094941
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 244 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:214)

rs_ID	r²[population]
rs10223467	0.82[EUR][1000 genomes]
rs1039030	0.87[EUR][1000 genomes]
rs1039031	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1039032	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1039033	0.94[ASN][1000 genomes]
rs10457077	0.87[EUR][1000 genomes]
rs10457808	0.80[EUR][1000 genomes]
rs10457809	0.80[EUR][1000 genomes]
rs10457844	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10457849	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1070990	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs108422	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10872622	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10872628	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10872634	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155496	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11155498	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11155596	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11155606	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11155610	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11155613	0.82[EUR][1000 genomes]
rs11155618	0.87[EUR][1000 genomes]
rs11155623	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155635	0.87[EUR][1000 genomes]
rs11155636	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155637	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11155638	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155653	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155659	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11155666	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155673	0.82[EUR][1000 genomes]
rs11752659	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12174806	0.82[EUR][1000 genomes]
rs12189562	0.96[ASN][1000 genomes]
rs12190574	0.96[ASN][1000 genomes]
rs12190903	0.80[EUR][1000 genomes]
rs12191199	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12193960	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12194255	0.89[EUR][1000 genomes]
rs12195369	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12199888	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12201852	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12202621	0.82[EUR][1000 genomes]
rs12206182	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12206838	0.86[EUR][1000 genomes]
rs12206945	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12207086	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12209777	0.89[EUR][1000 genomes]
rs12209887	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12210255	0.87[EUR][1000 genomes]
rs12210550	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12212435	0.87[EUR][1000 genomes]
rs12212736	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12213201	0.87[EUR][1000 genomes]
rs12214151	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12216199	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12216304	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12374612	0.80[EUR][1000 genomes]
rs12660725	0.80[EUR][1000 genomes]
rs12664626	0.87[EUR][1000 genomes]
rs13196803	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13208757	0.87[EUR][1000 genomes]
rs1336244	0.86[EUR][1000 genomes]
rs1336245	0.87[EUR][1000 genomes]
rs1414734	0.81[EUR][1000 genomes]
rs151572	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs151573	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs151637	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs151638	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs151640	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17303769	0.80[EUR][1000 genomes]
rs180963	0.91[EUR][1000 genomes]
rs183566	0.89[EUR][1000 genomes]
rs1875400	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1875401	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2001102	0.80[EUR][1000 genomes]
rs2036052	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2050549	0.82[EUR][1000 genomes]
rs2062634	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2062635	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2132168	0.87[EUR][1000 genomes]
rs2132169	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs239189	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs239190	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239193	0.96[ASN][1000 genomes]
rs239194	0.98[ASN][1000 genomes]
rs239195	0.98[ASN][1000 genomes]
rs239197	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239199	0.98[ASN][1000 genomes]
rs239201	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239203	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239204	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239206	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239207	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239208	0.89[EUR][1000 genomes]
rs239209	0.89[EUR][1000 genomes]
rs239211	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239212	0.98[ASN][1000 genomes]
rs239215	0.89[EUR][1000 genomes]
rs239216	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239217	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239218	0.86[EUR][1000 genomes]
rs239219	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239221	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239222	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239223	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239226	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239227	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239229	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239230	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239231	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239232	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239234	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs239235	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239236	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs239238	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239239	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239242	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239245	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239246	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239247	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239248	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs239249	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2398132	0.80[EUR][1000 genomes]
rs240110	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240111	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs240112	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240115	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs240141	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240143	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240145	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240146	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240147	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240148	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240149	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs240150	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs240151	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs240152	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs240153	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs240154	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs240156	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240164	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35168784	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35967345	0.87[EUR][1000 genomes]
rs369125	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs370757	0.98[ASN][1000 genomes]
rs3811078	0.81[EUR][1000 genomes]
rs395521	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs41288423	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4329121	0.81[ASN][1000 genomes]
rs4461738	0.80[EUR][1000 genomes]
rs4463266	0.82[EUR][1000 genomes]
rs454747	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4571568	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4839789	0.82[EUR][1000 genomes]
rs4839792	0.80[EUR][1000 genomes]
rs4840147	0.87[EUR][1000 genomes]
rs4840148	0.87[EUR][1000 genomes]
rs4840150	0.82[EUR][1000 genomes]
rs4840151	0.87[EUR][1000 genomes]
rs4840154	0.82[EUR][1000 genomes]
rs4840155	0.80[EUR][1000 genomes]
rs58266877	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62422675	0.84[ASN][1000 genomes]
rs6570922	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6570930	0.87[EUR][1000 genomes]
rs6904959	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6905113	0.82[EUR][1000 genomes]
rs6905221	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6907240	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6907444	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6909880	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6916468	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6922219	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6925065	0.82[EUR][1000 genomes]
rs6925316	0.82[EUR][1000 genomes]
rs6925823	0.86[EUR][1000 genomes]
rs6925840	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6932158	0.81[EUR][1000 genomes]
rs6938440	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs705583	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs705584	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs705585	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7356804	0.81[ASN][1000 genomes]
rs7451736	0.87[EUR][1000 genomes]
rs7740826	0.98[ASN][1000 genomes]
rs7742011	0.81[EUR][1000 genomes]
rs7746947	0.87[EUR][1000 genomes]
rs7746961	0.82[EUR][1000 genomes]
rs7747014	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7748644	0.89[EUR][1000 genomes]
rs7754085	0.80[EUR][1000 genomes]
rs846800	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs846803	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9322174	0.83[EUR][1000 genomes]
rs9322181	0.82[EUR][1000 genomes]
rs9322182	0.82[EUR][1000 genomes]
rs9322183	0.82[EUR][1000 genomes]
rs9322212	0.81[EUR][1000 genomes]
rs9322213	0.81[EUR][1000 genomes]
rs9377214	0.82[EUR][1000 genomes]
rs9386250	0.82[EUR][1000 genomes]
rs9386257	0.81[EUR][1000 genomes]
rs9390679	0.82[EUR][1000 genomes]
rs9390681	0.80[EUR][1000 genomes]
rs9390685	0.82[EUR][1000 genomes]
rs9399652	0.81[ASN][1000 genomes]
rs9399685	0.82[EUR][1000 genomes]
rs9404016	0.82[EUR][1000 genomes]
rs9404049	0.82[EUR][1000 genomes]
rs9404052	0.81[EUR][1000 genomes]
rs9404053	0.80[EUR][1000 genomes]
rs9498252	0.81[EUR][1000 genomes]
rs9498390	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949535	chr6:100740293-101469052	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv1028016	chr6:101001055-101158822	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv886445	chr6:101004751-101240763	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv886448	chr6:101018032-101123503	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv886449	chr6:101018032-101147095	Weak transcription Strong transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv886450	chr6:101018032-101168137	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv886451	chr6:101018032-101172328	Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv886452	chr6:101018032-101192051	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
9	nsv886453	chr6:101018032-101203051	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
10	nsv470848	chr6:101036713-101102584	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv463988	chr6:101036713-101158950	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
12	nsv604266	chr6:101036713-101158950	ZNF genes & repeats Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
13	esv1840320	chr6:101039215-101102585	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
14	nsv886454	chr6:101049108-101123503	Enhancers Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
15	nsv886455	chr6:101049108-101203051	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
16	nsv886456	chr6:101049108-101277926	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
17	nsv463990	chr6:101058886-101123503	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
18	nsv604269	chr6:101058886-101123503	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
19	nsv604270	chr6:101058886-101196080	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
20	nsv604271	chr6:101072307-101158950	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
21	nsv463991	chr6:101072307-101196080	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
22	nsv604272	chr6:101072307-101196080	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
23	nsv463992	chr6:101072307-101197953	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
24	nsv604273	chr6:101072307-101197953	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
25	nsv604274	chr6:101078718-101196080	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
26	nsv1027288	chr6:101091434-101121237	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
27	nsv1032826	chr6:101091434-101147095	Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
28	nsv1028583	chr6:101091434-101152631	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
29	nsv1015465	chr6:101091434-101157493	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
30	nsv1031817	chr6:101091995-101157493	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:101025800-101099800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr6:101032400-101102000	Weak transcription	Thymus	Thymus
3	chr6:101032400-101104400	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr6:101032600-101102000	Weak transcription	Brain Hippocampus Middle	brain
5	chr6:101032600-101110400	Weak transcription	Colon Smooth Muscle	Colon
6	chr6:101037400-101110600	Weak transcription	K562	blood
7	chr6:101037800-101107200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr6:101062600-101101600	Weak transcription	Rectal Smooth Muscle	rectum
9	chr6:101062800-101097000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:101063800-101102600	Weak transcription	Small Intestine	intestine
11	chr6:101067600-101102200	Weak transcription	Right Ventricle	heart
12	chr6:101068400-101106200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr6:101070400-101096200	Weak transcription	Spleen	Spleen
14	chr6:101070400-101100000	Weak transcription	H1 Cell Line	embryonic stem cell
15	chr6:101071600-101104600	Weak transcription	Brain Angular Gyrus	brain
16	chr6:101071600-101127800	Weak transcription	Hela-S3	cervix
17	chr6:101071800-101099200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
18	chr6:101075600-101100000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr6:101076400-101107200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
20	chr6:101076400-101110400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr6:101081200-101106000	Weak transcription	Fetal Brain Male	brain
22	chr6:101081400-101099200	Weak transcription	NHEK	skin
23	chr6:101081400-101100000	Weak transcription	HepG2	liver
24	chr6:101081600-101110800	Weak transcription	HSMMtube	muscle
25	chr6:101081800-101102600	Weak transcription	A549	lung
26	chr6:101082000-101102400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr6:101082200-101096000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr6:101082400-101096000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr6:101083200-101095200	Strong transcription	HSMM	muscle
30	chr6:101083200-101096000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr6:101083200-101097200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr6:101083400-101095600	Strong transcription	Liver	Liver
33	chr6:101083800-101101000	Weak transcription	Primary neutrophils fromperipheralblood	blood
34	chr6:101084800-101099200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
35	chr6:101085000-101096000	Weak transcription	Brain Germinal Matrix	brain
36	chr6:101085400-101101200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr6:101085400-101102200	Weak transcription	Pancreatic Islets	Pancreatic Islet
38	chr6:101085800-101111000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr6:101086000-101104800	Weak transcription	Fetal Lung	lung
40	chr6:101086000-101105800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr6:101086800-101101400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr6:101086800-101101400	Weak transcription	Fetal Muscle Leg	muscle
43	chr6:101086800-101111000	Weak transcription	NHLF	lung
44	chr6:101087000-101101600	Weak transcription	Cortex derived primary cultured neurospheres	brain
45	chr6:101087200-101110800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr6:101087400-101099800	Weak transcription	Fetal Muscle Trunk	muscle
47	chr6:101088400-101097200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr6:101088600-101095000	Strong transcription	Primary monocytes fromperipheralblood	blood
49	chr6:101089000-101095400	Strong transcription	HUES64 Cell Line	embryonic stem cell
50	chr6:101089000-101100800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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