Variant report

Variant rs239574
Chromosome Location chr6:80730262-80730263
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80714800-80738800 Weak transcription Small Intestine intestine
2 chr6:80715000-80730400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:80715000-80748000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr6:80715000-80752200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr6:80715000-80752400 Weak transcription Placenta Placenta
6 chr6:80715200-80730800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr6:80715200-80734000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:80715200-80734400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:80715200-80739200 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr6:80715200-80749600 Weak transcription Fetal Intestine Small intestine
11 chr6:80715200-80752000 Weak transcription Primary B cells from cord blood blood
12 chr6:80715200-80752200 Weak transcription Primary T cells from cord blood blood
13 chr6:80715400-80742200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr6:80715400-80743200 Weak transcription Brain Germinal Matrix brain
15 chr6:80715400-80745400 Weak transcription Fetal Lung lung
16 chr6:80715400-80755000 Weak transcription Duodenum Mucosa Duodenum
17 chr6:80715400-80756800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr6:80715600-80739200 Weak transcription Fetal Stomach stomach
19 chr6:80715600-80754400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr6:80715600-80763800 Weak transcription Placenta Amnion Placenta Amnion
21 chr6:80715800-80733400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr6:80715800-80753600 Strong transcription HUES48 Cell Line embryonic stem cell
23 chr6:80715800-80753800 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr6:80715800-80754400 Strong transcription iPS-20b Cell Line embryonic stem cell
25 chr6:80716000-80739200 Weak transcription NHEK skin
26 chr6:80716000-80743600 Weak transcription Fetal Heart heart
27 chr6:80716200-80754600 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr6:80716800-80753600 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr6:80717400-80739200 Strong transcription Primary monocytes fromperipheralblood blood
30 chr6:80719200-80732400 Weak transcription Muscle Satellite Cultured Cells --
31 chr6:80721600-80760400 Weak transcription Fetal Kidney kidney
32 chr6:80721800-80736600 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr6:80721800-80742000 Weak transcription A549 lung
34 chr6:80722200-80755400 Strong transcription Dnd41 blood
35 chr6:80722400-80741400 Weak transcription NHDF-Ad bronchial
36 chr6:80722800-80731600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr6:80723400-80732400 Weak transcription HMEC breast
38 chr6:80723600-80752200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr6:80724000-80749600 Weak transcription NHLF lung
40 chr6:80724800-80732400 Weak transcription NH-A brain
41 chr6:80724800-80741600 Weak transcription Hela-S3 cervix
42 chr6:80725200-80730400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr6:80726200-80730800 Weak transcription Primary hematopoietic stem cells blood
44 chr6:80726200-80730800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:80726200-80733600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr6:80726400-80731400 Weak transcription Osteobl bone
47 chr6:80726400-80732000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:80726800-80732000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr6:80727000-80732000 Weak transcription K562 blood
50 chr6:80727000-80733600 Weak transcription ES-I3 Cell Line embryonic stem cell

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