Variant report

Variant rs239577
Chromosome Location chr6:80731014-80731015
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80714800-80738800 Weak transcription Small Intestine intestine
2 chr6:80715000-80748000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:80715000-80752200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr6:80715000-80752400 Weak transcription Placenta Placenta
5 chr6:80715200-80734000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:80715200-80734400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:80715200-80739200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr6:80715200-80749600 Weak transcription Fetal Intestine Small intestine
9 chr6:80715200-80752000 Weak transcription Primary B cells from cord blood blood
10 chr6:80715200-80752200 Weak transcription Primary T cells from cord blood blood
11 chr6:80715400-80742200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr6:80715400-80743200 Weak transcription Brain Germinal Matrix brain
13 chr6:80715400-80745400 Weak transcription Fetal Lung lung
14 chr6:80715400-80755000 Weak transcription Duodenum Mucosa Duodenum
15 chr6:80715400-80756800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr6:80715600-80739200 Weak transcription Fetal Stomach stomach
17 chr6:80715600-80754400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr6:80715600-80763800 Weak transcription Placenta Amnion Placenta Amnion
19 chr6:80715800-80733400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:80715800-80753600 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr6:80715800-80753800 Strong transcription iPS-18 Cell Line embryonic stem cell
22 chr6:80715800-80754400 Strong transcription iPS-20b Cell Line embryonic stem cell
23 chr6:80716000-80739200 Weak transcription NHEK skin
24 chr6:80716000-80743600 Weak transcription Fetal Heart heart
25 chr6:80716200-80754600 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr6:80716800-80753600 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr6:80717400-80739200 Strong transcription Primary monocytes fromperipheralblood blood
28 chr6:80719200-80732400 Weak transcription Muscle Satellite Cultured Cells --
29 chr6:80721600-80760400 Weak transcription Fetal Kidney kidney
30 chr6:80721800-80736600 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr6:80721800-80742000 Weak transcription A549 lung
32 chr6:80722200-80755400 Strong transcription Dnd41 blood
33 chr6:80722400-80741400 Weak transcription NHDF-Ad bronchial
34 chr6:80722800-80731600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr6:80723400-80732400 Weak transcription HMEC breast
36 chr6:80723600-80752200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr6:80724000-80749600 Weak transcription NHLF lung
38 chr6:80724800-80732400 Weak transcription NH-A brain
39 chr6:80724800-80741600 Weak transcription Hela-S3 cervix
40 chr6:80726200-80733600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr6:80726400-80731400 Weak transcription Osteobl bone
42 chr6:80726400-80732000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:80726800-80732000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:80727000-80732000 Weak transcription K562 blood
45 chr6:80727000-80733600 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr6:80727000-80738800 Weak transcription GM12878-XiMat blood
47 chr6:80727200-80755200 Weak transcription Fetal Brain Female brain
48 chr6:80727400-80732000 Weak transcription Fetal Muscle Leg muscle
49 chr6:80727400-80732000 Weak transcription HUVEC blood vessel
50 chr6:80727400-80738200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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