Variant report

Variant	rs2415373
Chromosome Location	chr14:37507789-37507790
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:37499430..37501111-chr14:37506004..37508252,2	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1012198	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs10134406	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs10141752	1.00[CEU][hapmap]
rs10220604	1.00[CEU][hapmap]
rs1057564	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs1404	0.82[EUR][1000 genomes]
rs17106209	1.00[CEU][hapmap]
rs17106216	1.00[CEU][hapmap]
rs17178484	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17178639	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs17178764	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs17767749	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17767929	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17841015	1.00[CEU][hapmap]
rs1884775	1.00[CEU][hapmap]
rs1950372	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs1950814	1.00[CEU][hapmap]
rs1955758	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs1956423	1.00[CEU][hapmap]
rs1956424	1.00[CEU][hapmap]
rs2038309	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs2415379	1.00[CEU][hapmap]
rs2415380	1.00[CEU][hapmap]
rs2415386	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs35576618	1.00[CEU][hapmap]
rs57235322	0.82[EUR][1000 genomes]
rs6571781	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs6571783	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs6571785	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs6571786	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs6571787	0.82[EUR][1000 genomes]
rs6571788	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs7142723	0.86[EUR][1000 genomes]
rs7151524	1.00[CEU][hapmap]
rs7159967	0.86[EUR][1000 genomes]
rs725243	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs8009630	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs8012664	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs8014610	0.86[EUR][1000 genomes]
rs8017826	0.87[EUR][1000 genomes]
rs8019489	1.00[CEU][hapmap]
rs976171	1.00[CEU][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534288	chr14:37254539-37697745	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1036201	chr14:37498841-37542041	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1037719	chr14:37498841-37546359	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv526786	chr14:37499904-37537352	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1048854	chr14:37505438-37546359	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:37504600-37508200	Enhancers	HepG2	liver
2	chr14:37504800-37508400	Enhancers	H9 Cell Line	embryonic stem cell
3	chr14:37505200-37509000	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr14:37507200-37508000	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr14:37507400-37507800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr14:37507600-37508600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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