Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1041075	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1046596	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10873093	0.86[EUR][1000 genomes]
rs171339	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2010895	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs241513	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs241514	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs241520	0.93[ASN][1000 genomes]
rs241521	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs241522	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs241551	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs241552	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs241554	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs241556	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs241558	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs241562	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs241565	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs241566	0.92[ASN][1000 genomes]
rs3186565	0.81[TSI][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3850294	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3850295	0.81[TSI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4901637	0.84[EUR][1000 genomes]
rs61526546	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7149660	0.84[EUR][1000 genomes]
rs7150067	0.84[EUR][1000 genomes]
rs8004543	0.81[TSI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs241561	C14orf166	cis	cerebellum	SCAN
rs241561	PELI2	cis	parietal	SCAN
rs241561	FBXO34	cis	cerebellum	SCAN

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56541000-56554200	Weak transcription	Gastric	stomach
2	chr14:56549400-56554200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr14:56549400-56554200	Weak transcription	Dnd41	blood
4	chr14:56549400-56554600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr14:56550800-56551200	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr14:56550800-56551200	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr14:56550800-56551200	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr14:56550800-56554000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr14:56551000-56553000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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