Variant report

Variant rs2421642
Chromosome Location chr18:30334389-30334390
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:30323000-30335000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr18:30328800-30336000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr18:30330200-30335600 Weak transcription Primary B cells from peripheral blood blood
4 chr18:30331800-30334600 Weak transcription HepG2 liver
5 chr18:30333400-30335200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr18:30333800-30334400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr18:30333800-30334400 Bivalent Enhancer Brain Substantia Nigra brain
8 chr18:30333800-30334600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr18:30333800-30335600 Enhancers HUES64 Cell Line embryonic stem cell
10 chr18:30333800-30335800 Enhancers iPS-18 Cell Line embryonic stem cell
11 chr18:30333800-30341400 Weak transcription Fetal Kidney kidney
12 chr18:30334000-30334800 Genic enhancers Primary B cells from cord blood blood
13 chr18:30334000-30335200 Enhancers H1 Cell Line embryonic stem cell
14 chr18:30334000-30335200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr18:30334000-30335600 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr18:30334000-30335800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr18:30334000-30336000 Enhancers HUES48 Cell Line embryonic stem cell
18 chr18:30334200-30335200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
19 chr18:30334200-30338800 Weak transcription Dnd41 blood

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