Variant report

Variant	rs2421783
Chromosome Location	chr1:71220330-71220331
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1108801	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11209697	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12022025	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12033260	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12046339	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1327451	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1327453	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1343786	0.83[ASN][1000 genomes]
rs1409985	0.81[ASN][1000 genomes]
rs1889599	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2257598	0.82[EUR][1000 genomes]
rs2421790	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34289107	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34384777	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4650085	1.00[ASN][1000 genomes]
rs7533733	0.81[ASN][1000 genomes]
rs871577	1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71218800-71221800	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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