The 2.0 version of rSNPBase

Variant report

Variant rs2430484
Chromosome Location chr7:104581962-104581963
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:104569800-104584000 Weak transcription Esophagus oesophagus
2 chr7:104573800-104583200 Weak transcription Fetal Heart heart
3 chr7:104574400-104582000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr7:104575400-104582000 Weak transcription Stomach Mucosa stomach
5 chr7:104580000-104585400 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr7:104580200-104582000 Weak transcription HepG2 liver
7 chr7:104580400-104584000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr7:104580400-104584000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr7:104580400-104584000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr7:104580400-104584200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr7:104580400-104584200 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr7:104580600-104582800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr7:104580600-104583800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr7:104580800-104582600 ZNF genes & repeats Fetal Thymus thymus
15 chr7:104581000-104582000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr7:104581000-104582000 Weak transcription Spleen Spleen
17 chr7:104581000-104582600 Weak transcription Pancreas Pancrea
18 chr7:104581000-104584000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr7:104581000-104584400 Active TSS Rectal Mucosa Donor 29 rectum
20 chr7:104581000-104585600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr7:104581000-104586800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr7:104581200-104582000 Active TSS Primary B cells from cord blood blood
23 chr7:104581200-104582000 Active TSS Primary B cells from peripheral blood blood
24 chr7:104581200-104582000 Active TSS Primary T regulatory cells fromperipheralblood blood
25 chr7:104581200-104582000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
26 chr7:104581200-104582400 Active TSS Fetal Kidney kidney
27 chr7:104581200-104582600 Flanking Active TSS Primary T cells fromperipheralblood blood
28 chr7:104581200-104582600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr7:104581400-104582000 Active TSS Primary T helper naive cells from peripheral blood blood
30 chr7:104581400-104582000 Active TSS Primary T killer memory cells from peripheral blood blood
31 chr7:104581400-104582000 Active TSS Duodenum Mucosa Duodenum
32 chr7:104581400-104582200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr7:104581400-104582400 Active TSS Stomach Smooth Muscle stomach
34 chr7:104581400-104582400 Active TSS Thymus Thymus
35 chr7:104581400-104582600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
36 chr7:104581400-104582800 Active TSS Colonic Mucosa Colon
37 chr7:104581400-104583200 Active TSS Adipose Nuclei Adipose
38 chr7:104581400-104584800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
39 chr7:104581600-104582200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
40 chr7:104581600-104582400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
41 chr7:104581600-104582400 Active TSS Rectal Smooth Muscle rectum
42 chr7:104581600-104582800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
43 chr7:104581600-104582800 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
44 chr7:104581800-104582000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
45 chr7:104581800-104582000 Active TSS HMEC breast
46 chr7:104581800-104582200 Enhancers Lung lung
47 chr7:104581800-104582200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
48 chr7:104581800-104582400 Flanking Active TSS Primary monocytes fromperipheralblood blood
49 chr7:104581800-104582400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr7:104581800-104582400 Active TSS Liver Liver

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Last update: Aug 31, 2015