The 2.0 version of rSNPBase

Variant report

Variant rs2452793
Chromosome Location chr12:51539508-51539509
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477800-51550200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr12:51503200-51560200 Weak transcription Right Ventricle heart
3 chr12:51504800-51563400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr12:51507800-51539800 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr12:51508000-51543000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr12:51510200-51554400 Weak transcription K562 blood
7 chr12:51511400-51558800 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr12:51513000-51565400 Weak transcription Fetal Lung lung
9 chr12:51517200-51547600 Weak transcription Fetal Kidney kidney
10 chr12:51517200-51554600 Weak transcription HepG2 liver
11 chr12:51519000-51541000 Weak transcription Brain Substantia Nigra brain
12 chr12:51519000-51561600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr12:51519000-51565000 Weak transcription Colon Smooth Muscle Colon
14 chr12:51519000-51565200 Weak transcription Left Ventricle heart
15 chr12:51519000-51565200 Weak transcription Pancreas Pancrea
16 chr12:51519000-51565800 Weak transcription Esophagus oesophagus
17 chr12:51519200-51540000 Weak transcription Thymus Thymus
18 chr12:51519200-51542000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr12:51519200-51544400 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr12:51519200-51544600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr12:51519200-51554600 Weak transcription NHDF-Ad bronchial
22 chr12:51519200-51559600 Weak transcription Lung lung
23 chr12:51519200-51563800 Weak transcription Fetal Brain Female brain
24 chr12:51519200-51565000 Weak transcription Stomach Smooth Muscle stomach
25 chr12:51519400-51550200 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr12:51519400-51565200 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr12:51521600-51541800 Weak transcription NHLF lung
28 chr12:51521600-51565200 Weak transcription HSMM muscle
29 chr12:51523600-51544400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr12:51526000-51558800 Weak transcription GM12878-XiMat blood
31 chr12:51526800-51542600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr12:51526800-51556400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr12:51527200-51541000 Weak transcription Muscle Satellite Cultured Cells --
34 chr12:51527200-51542200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr12:51527400-51565200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr12:51527600-51540400 Weak transcription Colonic Mucosa Colon
37 chr12:51528200-51554600 Weak transcription A549 lung
38 chr12:51530600-51564200 Weak transcription Fetal Muscle Leg muscle
39 chr12:51531200-51563400 Weak transcription Hela-S3 cervix
40 chr12:51531800-51550200 Weak transcription NHEK skin
41 chr12:51531800-51554400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr12:51532000-51565000 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr12:51532200-51550000 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr12:51532400-51540400 Weak transcription Duodenum Mucosa Duodenum
45 chr12:51532400-51541200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr12:51532400-51544800 Weak transcription Brain Anterior Caudate brain
47 chr12:51532400-51564000 Weak transcription Primary T cells from cord blood blood
48 chr12:51532600-51540000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr12:51532600-51541400 Weak transcription Fetal Muscle Trunk muscle
50 chr12:51532600-51544800 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015