Variant report
| Variant | rs2469553 |
|---|---|
| Chromosome Location | chr15:76640162-76640163 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:76630200-76641800 | Weak transcription | A549 | lung |
| 2 | chr15:76636400-76640200 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 3 | chr15:76637800-76640200 | Bivalent/Poised TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 4 | chr15:76638000-76640400 | Bivalent/Poised TSS | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr15:76638200-76640200 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr15:76638200-76640200 | Bivalent/Poised TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 7 | chr15:76638600-76640200 | Bivalent/Poised TSS | Small Intestine | intestine |
| 8 | chr15:76638600-76640600 | Active TSS | Stomach Smooth Muscle | stomach |
| 9 | chr15:76639000-76640200 | Bivalent Enhancer | Primary monocytes fromperipheralblood | blood |
| 10 | chr15:76639000-76640200 | Bivalent Enhancer | Fetal Adrenal Gland | Adrenal Gland |
| 11 | chr15:76639000-76640400 | Active TSS | Rectal Smooth Muscle | rectum |
| 12 | chr15:76639000-76640600 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 13 | chr15:76639200-76640200 | Bivalent/Poised TSS | H9 Cell Line | embryonic stem cell |
| 14 | chr15:76639200-76640200 | Bivalent Enhancer | Primary B cells from peripheral blood | blood |
| 15 | chr15:76639200-76640200 | Bivalent Enhancer | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr15:76639200-76640200 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 17 | chr15:76639200-76640200 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
| 18 | chr15:76639200-76646400 | Weak transcription | Aorta | Aorta |
| 19 | chr15:76639400-76640200 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 20 | chr15:76639400-76640400 | Bivalent Enhancer | Primary B cells from cord blood | blood |
| 21 | chr15:76639400-76641200 | Weak transcription | HepG2 | liver |
| 22 | chr15:76639600-76640200 | Bivalent Enhancer | Primary neutrophils fromperipheralblood | blood |
| 23 | chr15:76639600-76640200 | Bivalent Enhancer | Primary T helper cells fromperipheralblood | blood |
| 24 | chr15:76639600-76640200 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 25 | chr15:76639600-76640400 | Bivalent Enhancer | Primary hematopoietic stem cells | blood |
| 26 | chr15:76639600-76641800 | Weak transcription | Hela-S3 | cervix |
| 27 | chr15:76639800-76640200 | Flanking Bivalent TSS/Enh | H1 Cell Line | embryonic stem cell |
| 28 | chr15:76639800-76640200 | Bivalent Enhancer | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 29 | chr15:76639800-76640200 | Bivalent Enhancer | H9 Derived Neuron Cultured Cells | ES cell derived |
| 30 | chr15:76639800-76640200 | Flanking Bivalent TSS/Enh | Fetal Intestine Small | intestine |
| 31 | chr15:76639800-76640400 | Flanking Bivalent TSS/Enh | HUES6 Cell Line | embryonic stem cell |
| 32 | chr15:76639800-76640400 | Flanking Bivalent TSS/Enh | iPS-18 Cell Line | embryonic stem cell |
| 33 | chr15:76639800-76640600 | Bivalent/Poised TSS | Duodenum Smooth Muscle | Duodenum |
| 34 | chr15:76639800-76642000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr15:76639800-76659800 | Weak transcription | Gastric | stomach |
| 36 | chr15:76639800-76682600 | Weak transcription | Pancreas | Pancrea |
| 37 | chr15:76639800-76695400 | Weak transcription | Spleen | Spleen |
| 38 | chr15:76639800-76727400 | Weak transcription | Right Ventricle | heart |
| 39 | chr15:76640000-76640200 | Bivalent Enhancer | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 40 | chr15:76640000-76640200 | Bivalent Enhancer | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 41 | chr15:76640000-76640200 | Flanking Bivalent TSS/Enh | HUES48 Cell Line | embryonic stem cell |
| 42 | chr15:76640000-76640200 | Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 43 | chr15:76640000-76640200 | Enhancers | Colonic Mucosa | Colon |
| 44 | chr15:76640000-76640200 | Bivalent Enhancer | Fetal Kidney | kidney |
| 45 | chr15:76640000-76640200 | Flanking Bivalent TSS/Enh | Rectal Mucosa Donor 31 | rectum |
| 46 | chr15:76640000-76640400 | Flanking Bivalent TSS/Enh | HUES64 Cell Line | embryonic stem cell |
| 47 | chr15:76640000-76640400 | Flanking Bivalent TSS/Enh | iPS-20b Cell Line | embryonic stem cell |
| 48 | chr15:76640000-76640400 | Active TSS | Fetal Stomach | stomach |
| 49 | chr15:76640000-76640400 | ZNF genes & repeats | K562 | blood |
| 50 | chr15:76640000-76642000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
