Variant report

Variant rs2501078
Chromosome Location chr1:225117561-225117562
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225116800-225118000 Active TSS iPS-20b Cell Line embryonic stem cell
2 chr1:225116800-225118200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr1:225116800-225118400 Active TSS HUES64 Cell Line embryonic stem cell
4 chr1:225116800-225118400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr1:225116800-225118400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:225116800-225118400 Active TSS Pancreatic Islets Pancreatic Islet
7 chr1:225116800-225118600 Active TSS A549 lung
8 chr1:225116800-225118800 Active TSS Hela-S3 cervix
9 chr1:225117000-225117600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:225117000-225117600 Active TSS GM12878-XiMat blood
11 chr1:225117000-225117800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:225117000-225117800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:225117000-225117800 Active TSS Primary hematopoietic stem cells short term culture blood
14 chr1:225117000-225117800 Active TSS Muscle Satellite Cultured Cells --
15 chr1:225117000-225117800 Bivalent/Poised TSS Brain Angular Gyrus brain
16 chr1:225117000-225117800 Bivalent/Poised TSS Brain Hippocampus Middle brain
17 chr1:225117000-225117800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr1:225117000-225117800 Active TSS Esophagus oesophagus
19 chr1:225117000-225117800 Bivalent/Poised TSS Left Ventricle heart
20 chr1:225117000-225117800 Active TSS Skeletal Muscle Female skeletal muscle
21 chr1:225117000-225117800 Active TSS Small Intestine intestine
22 chr1:225117000-225118000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:225117000-225118000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
24 chr1:225117000-225118000 Active TSS Breast Myoepithelial Primary Cells Breast
25 chr1:225117000-225118000 Active TSS Primary T cells from cord blood blood
26 chr1:225117000-225118000 Active TSS Primary Natural Killer cells fromperipheralblood blood
27 chr1:225117000-225118000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:225117000-225118000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:225117000-225118000 Bivalent/Poised TSS Brain Germinal Matrix brain
30 chr1:225117000-225118000 Active TSS Colonic Mucosa Colon
31 chr1:225117000-225118000 Active TSS Fetal Kidney kidney
32 chr1:225117000-225118000 Active TSS Fetal Lung lung
33 chr1:225117000-225118000 Active TSS Pancreas Pancrea
34 chr1:225117000-225118000 Active TSS Rectal Mucosa Donor 31 rectum
35 chr1:225117000-225118000 Active TSS Rectal Smooth Muscle rectum
36 chr1:225117000-225118000 Active TSS Thymus Thymus
37 chr1:225117000-225118000 Active TSS HSMM muscle
38 chr1:225117000-225118000 Active TSS HSMMtube muscle
39 chr1:225117000-225118200 Active TSS ES-WA7 Cell Line embryonic stem cell
40 chr1:225117000-225118200 Active TSS H1 Cell Line embryonic stem cell
41 chr1:225117000-225118200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:225117000-225118200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr1:225117000-225118200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:225117000-225118200 Active TSS HUES48 Cell Line embryonic stem cell
45 chr1:225117000-225118200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:225117000-225118200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:225117000-225118200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:225117000-225118200 Flanking Active TSS Adipose Nuclei Adipose
49 chr1:225117000-225118200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
50 chr1:225117000-225118200 Active TSS Duodenum Smooth Muscle Duodenum

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