Variant report
Variant | rs2505946 |
---|---|
Chromosome Location | chr6:80810683-80810684 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000083123 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10080237 | 0.84[ASN][1000 genomes] |
rs10080500 | 0.82[ASN][1000 genomes] |
rs10943694 | 0.84[ASN][1000 genomes] |
rs11962614 | 0.87[ASN][1000 genomes] |
rs12203867 | 0.87[ASN][1000 genomes] |
rs12208016 | 0.87[ASN][1000 genomes] |
rs2322630 | 0.84[ASN][1000 genomes] |
rs2322631 | 0.84[ASN][1000 genomes] |
rs2490224 | 0.94[ASN][1000 genomes] |
rs2490230 | 0.92[ASN][1000 genomes] |
rs2490232 | 0.82[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs2505945 | 0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2874829 | 0.84[ASN][1000 genomes] |
rs35355485 | 0.87[ASN][1000 genomes] |
rs35447745 | 0.91[ASN][1000 genomes] |
rs4437429 | 0.87[ASN][1000 genomes] |
rs6916507 | 0.84[ASN][1000 genomes] |
rs7453746 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs9294170 | 0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9294171 | 0.84[ASN][1000 genomes] |
rs9350846 | 0.83[ASN][1000 genomes] |
rs9352801 | 0.90[ASN][1000 genomes] |
rs9352803 | 0.83[ASN][1000 genomes] |
rs9359408 | 0.87[ASN][1000 genomes] |
rs9359409 | 0.87[ASN][1000 genomes] |
rs9361584 | 0.87[ASN][1000 genomes] |
rs9361587 | 0.82[ASN][1000 genomes] |
rs9443734 | 0.87[ASN][1000 genomes] |
rs9448886 | 0.87[ASN][1000 genomes] |
rs9448893 | 0.84[ASN][1000 genomes] |
rs9448897 | 0.83[ASN][1000 genomes] |
rs9448898 | 0.84[ASN][1000 genomes] |
rs9448899 | 0.84[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:80809600-80815800 | Weak transcription | Aorta | Aorta |
2 | chr6:80810400-80815400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |