The 2.0 version of rSNPBase

Variant report

Variant rs2529115
Chromosome Location chr7:101897945-101897946
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:101846000-101904200 Weak transcription Stomach Mucosa stomach
2 chr7:101865000-101904200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr7:101866800-101907600 Weak transcription NH-A brain
4 chr7:101867400-101898000 Strong transcription Primary monocytes fromperipheralblood blood
5 chr7:101867400-101898000 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr7:101867800-101900400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr7:101870200-101898000 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr7:101872400-101898800 Weak transcription Brain Angular Gyrus brain
9 chr7:101872400-101904000 Weak transcription Brain Cingulate Gyrus brain
10 chr7:101873600-101904000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr7:101875600-101898000 Strong transcription Dnd41 blood
12 chr7:101880400-101898400 Strong transcription Fetal Stomach stomach
13 chr7:101883000-101904000 Weak transcription Fetal Brain Female brain
14 chr7:101884200-101904000 Weak transcription Colon Smooth Muscle Colon
15 chr7:101885200-101898400 Strong transcription Fetal Intestine Small intestine
16 chr7:101885200-101901800 Weak transcription A549 lung
17 chr7:101885600-101899400 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr7:101886200-101904200 Weak transcription Brain Substantia Nigra brain
19 chr7:101886200-101906200 Weak transcription Primary B cells from peripheral blood blood
20 chr7:101886400-101899200 Weak transcription Duodenum Mucosa Duodenum
21 chr7:101886800-101899200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr7:101888400-101901000 Weak transcription Hela-S3 cervix
23 chr7:101888800-101907800 Weak transcription Fetal Lung lung
24 chr7:101892800-101901800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr7:101892800-101928000 Weak transcription Esophagus oesophagus
26 chr7:101892800-101928400 Weak transcription Right Ventricle heart
27 chr7:101893800-101899200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr7:101893800-101903000 Weak transcription Aorta Aorta
29 chr7:101893800-101913400 Weak transcription Brain Hippocampus Middle brain
30 chr7:101894000-101899600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr7:101894000-101900200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr7:101894000-101902000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr7:101894000-101902000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr7:101894000-101904000 Weak transcription Left Ventricle heart
35 chr7:101894000-101908000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr7:101894000-101911800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr7:101894000-101916800 Weak transcription Lung lung
38 chr7:101894200-101900400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr7:101894200-101901400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr7:101894200-101904000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr7:101894400-101899000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr7:101894400-101899600 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr7:101894800-101900000 Enhancers Fetal Muscle Leg muscle
44 chr7:101895400-101899800 Enhancers Fetal Muscle Trunk muscle
45 chr7:101895800-101898000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr7:101896000-101901600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr7:101896000-101904000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr7:101896400-101898000 Strong transcription Spleen Spleen
49 chr7:101896400-101898200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr7:101896400-101898200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015