The 2.0 version of rSNPBase

Variant report

Variant rs2554326
Chromosome Location chr15:52152898-52152899
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52130000-52155000 Weak transcription Fetal Muscle Trunk muscle
2 chr15:52130800-52155200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr15:52135800-52155000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr15:52136000-52155200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr15:52136200-52155000 Weak transcription Aorta Aorta
6 chr15:52136600-52153400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr15:52137800-52155000 Weak transcription Fetal Intestine Large intestine
8 chr15:52138000-52153400 Weak transcription Esophagus oesophagus
9 chr15:52138000-52155000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr15:52138600-52155000 Weak transcription Fetal Muscle Leg muscle
11 chr15:52139000-52153400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr15:52139200-52156200 Weak transcription Fetal Intestine Small intestine
13 chr15:52139400-52156600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr15:52139600-52154800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr15:52139800-52153400 Weak transcription Fetal Thymus thymus
16 chr15:52139800-52153600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr15:52140000-52155000 Weak transcription NH-A brain
18 chr15:52140200-52155400 Weak transcription HSMMtube muscle
19 chr15:52140400-52155000 Weak transcription HSMM muscle
20 chr15:52140600-52155400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr15:52141400-52155400 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr15:52141600-52155000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr15:52141600-52166800 Weak transcription Stomach Mucosa stomach
24 chr15:52141800-52154000 Weak transcription Adipose Nuclei Adipose
25 chr15:52141800-52155000 Weak transcription Fetal Stomach stomach
26 chr15:52141800-52176200 Weak transcription Brain Cingulate Gyrus brain
27 chr15:52142200-52155400 Weak transcription Colon Smooth Muscle Colon
28 chr15:52143200-52153400 Weak transcription Spleen Spleen
29 chr15:52143400-52153400 Weak transcription Right Atrium heart
30 chr15:52144200-52153400 Weak transcription Lung lung
31 chr15:52144200-52155000 Weak transcription K562 blood
32 chr15:52145000-52153200 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr15:52145000-52156600 Weak transcription Fetal Brain Female brain
34 chr15:52145400-52153800 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr15:52145600-52153400 Weak transcription Primary T cells fromperipheralblood blood
36 chr15:52145600-52155000 Weak transcription Placenta Placenta
37 chr15:52145800-52154000 Weak transcription Left Ventricle heart
38 chr15:52145800-52176600 Weak transcription Psoas Muscle Psoas
39 chr15:52146400-52153600 Weak transcription Small Intestine intestine
40 chr15:52146600-52153200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr15:52146600-52155200 Weak transcription Stomach Smooth Muscle stomach
42 chr15:52147400-52155000 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr15:52147600-52153800 Weak transcription Gastric stomach
44 chr15:52148000-52155000 Weak transcription Osteobl bone
45 chr15:52148200-52153400 Weak transcription Primary B cells from peripheral blood blood
46 chr15:52148200-52153400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr15:52148200-52155000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr15:52148200-52157000 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr15:52148200-52176200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr15:52148400-52155200 Weak transcription Duodenum Smooth Muscle Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015