The 2.0 version of rSNPBase

Variant report

Variant rs2560997
Chromosome Location chr19:52937530-52937531
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52923400-52939800 Weak transcription Right Ventricle heart
2 chr19:52926000-52938200 Weak transcription Psoas Muscle Psoas
3 chr19:52927400-52941200 Weak transcription Brain Cingulate Gyrus brain
4 chr19:52929000-52941400 Weak transcription Brain Substantia Nigra brain
5 chr19:52930000-52941400 Weak transcription Brain Hippocampus Middle brain
6 chr19:52930400-52938200 Weak transcription Stomach Smooth Muscle stomach
7 chr19:52931600-52937600 Weak transcription Brain Angular Gyrus brain
8 chr19:52932800-52938400 Weak transcription Ovary ovary
9 chr19:52934400-52938400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr19:52935000-52938400 Weak transcription Brain Anterior Caudate brain
11 chr19:52935200-52938400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr19:52935200-52938600 Weak transcription Left Ventricle heart
13 chr19:52936800-52939000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
14 chr19:52937000-52939000 Strong transcription Brain Inferior Temporal Lobe brain
15 chr19:52937000-52939000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
16 chr19:52937200-52941200 Strong transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015