Variant report

Variant rs257777
Chromosome Location chr5:15797943-15797944
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:15794400-15799000 Weak transcription Brain Germinal Matrix brain
2 chr5:15794800-15799200 Weak transcription Colon Smooth Muscle Colon
3 chr5:15795000-15798000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr5:15795200-15799000 Weak transcription Fetal Brain Female brain
5 chr5:15795200-15800000 Enhancers Brain Angular Gyrus brain
6 chr5:15795400-15798000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr5:15795400-15798000 Enhancers Brain Cingulate Gyrus brain
8 chr5:15795400-15798000 Enhancers Brain Hippocampus Middle brain
9 chr5:15795400-15799200 Weak transcription Ovary ovary
10 chr5:15795400-15799200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr5:15795600-15798000 Weak transcription Fetal Lung lung
12 chr5:15795600-15798400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr5:15796000-15798200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr5:15796000-15798200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr5:15796400-15804600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:15796600-15799400 Enhancers Right Ventricle heart
17 chr5:15796600-15799400 Enhancers HSMMtube muscle
18 chr5:15796800-15799200 Enhancers Fetal Muscle Leg muscle
19 chr5:15796800-15799400 Enhancers Fetal Heart heart
20 chr5:15796800-15799800 Enhancers Left Ventricle heart
21 chr5:15796800-15800600 Enhancers Adipose Nuclei Adipose
22 chr5:15797000-15799000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:15797200-15798400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:15797200-15798600 Flanking Active TSS Brain Inferior Temporal Lobe brain
25 chr5:15797400-15798200 Weak transcription Aorta Aorta
26 chr5:15797400-15798400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:15797600-15798400 Flanking Active TSS Brain Anterior Caudate brain
28 chr5:15797600-15798400 Enhancers Fetal Muscle Trunk muscle
29 chr5:15797600-15799200 Enhancers Cortex derived primary cultured neurospheres brain
30 chr5:15797800-15798000 Enhancers Brain Substantia Nigra brain
31 chr5:15797800-15803800 Weak transcription H1 Cell Line embryonic stem cell

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