Variant report

Variant rs257782
Chromosome Location chr5:15792846-15792847
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:15764200-15796800 Weak transcription Aorta Aorta
2 chr5:15786000-15793800 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr5:15786000-15794200 Weak transcription Fetal Brain Female brain
4 chr5:15786600-15794000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr5:15787400-15794000 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr5:15787600-15793800 Weak transcription Adipose Nuclei Adipose
7 chr5:15787600-15796600 Weak transcription Right Ventricle heart
8 chr5:15788200-15794200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr5:15789000-15794000 Weak transcription Fetal Stomach stomach
10 chr5:15789800-15793800 Enhancers Fetal Heart heart
11 chr5:15789800-15797400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr5:15790000-15794000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr5:15790000-15794600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr5:15790400-15793400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr5:15790400-15795000 Enhancers Brain Substantia Nigra brain
16 chr5:15791000-15794400 Enhancers Right Atrium heart
17 chr5:15791200-15794000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr5:15791200-15794200 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr5:15791200-15794200 Weak transcription Rectal Smooth Muscle rectum
20 chr5:15791600-15794000 Enhancers Brain Hippocampus Middle brain
21 chr5:15791600-15794200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:15791600-15795000 Enhancers Brain Cingulate Gyrus brain
23 chr5:15791600-15797200 Enhancers Brain Inferior Temporal Lobe brain
24 chr5:15791800-15794000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr5:15791800-15796800 Weak transcription Fetal Muscle Leg muscle
26 chr5:15792200-15794000 Weak transcription Colon Smooth Muscle Colon
27 chr5:15792200-15794000 Weak transcription HUVEC blood vessel
28 chr5:15792200-15794400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr5:15792200-15795200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr5:15792600-15793000 Weak transcription Brain Angular Gyrus brain
31 chr5:15792600-15793800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr5:15792600-15794600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:15792600-15794800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:15792600-15795000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr5:15792600-15795800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr5:15792600-15796600 Weak transcription HSMMtube muscle
37 chr5:15792600-15797200 Weak transcription HSMM muscle
38 chr5:15792800-15793200 Enhancers Spleen Spleen
39 chr5:15792800-15793400 Weak transcription Brain Anterior Caudate brain
40 chr5:15792800-15794200 Enhancers Left Ventricle heart
41 chr5:15792800-15794600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr5:15792800-15795400 Enhancers Ovary ovary
43 chr5:15792800-15796000 Enhancers Fetal Adrenal Gland Adrenal Gland

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