Variant report

Variant rs258813
Chromosome Location chr5:142674690-142674691
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:142650600-142677200 Weak transcription Aorta Aorta
2 chr5:142653200-142674800 Weak transcription Rectal Smooth Muscle rectum
3 chr5:142655800-142677200 Weak transcription Spleen Spleen
4 chr5:142655800-142699200 Strong transcription Dnd41 blood
5 chr5:142656000-142677400 Weak transcription Gastric stomach
6 chr5:142656600-142677000 Weak transcription Lung lung
7 chr5:142657800-142695400 Weak transcription Pancreas Pancrea
8 chr5:142658000-142679000 Weak transcription Colonic Mucosa Colon
9 chr5:142658200-142694800 Weak transcription Right Ventricle heart
10 chr5:142658400-142714800 Weak transcription Esophagus oesophagus
11 chr5:142658800-142677400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr5:142659400-142677200 Weak transcription HSMMtube muscle
13 chr5:142659600-142677400 Weak transcription Ovary ovary
14 chr5:142659800-142679400 Weak transcription Small Intestine intestine
15 chr5:142659800-142692600 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr5:142661600-142677200 Weak transcription HUVEC blood vessel
17 chr5:142664000-142677400 Weak transcription Brain Cingulate Gyrus brain
18 chr5:142664000-142684600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr5:142664000-142685000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr5:142664400-142681200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr5:142664400-142693400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:142667200-142682000 Strong transcription Primary T helper cells PMA-I stimulated --
23 chr5:142667400-142688800 Strong transcription Primary monocytes fromperipheralblood blood
24 chr5:142667800-142681200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr5:142668000-142680200 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr5:142668200-142680200 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr5:142668600-142674800 Strong transcription Muscle Satellite Cultured Cells --
28 chr5:142668600-142678400 Strong transcription A549 lung
29 chr5:142668600-142680400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:142668600-142680800 Strong transcription NHDF-Ad bronchial
31 chr5:142668600-142688800 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr5:142668800-142676800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:142668800-142678600 Weak transcription Fetal Stomach stomach
34 chr5:142668800-142682400 Strong transcription GM12878-XiMat blood
35 chr5:142668800-142693800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr5:142669000-142680800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:142669200-142680200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr5:142669400-142680400 Strong transcription Osteobl bone
39 chr5:142669600-142682600 Strong transcription Primary B cells from peripheral blood blood
40 chr5:142669800-142675200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr5:142669800-142675200 Strong transcription Left Ventricle heart
42 chr5:142669800-142675200 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr5:142669800-142677200 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr5:142669800-142680200 Strong transcription Primary T cells from cord blood blood
45 chr5:142669800-142680200 Strong transcription Duodenum Mucosa Duodenum
46 chr5:142669800-142680400 Strong transcription Fetal Muscle Leg muscle
47 chr5:142669800-142680400 Strong transcription Fetal Thymus thymus
48 chr5:142669800-142680400 Strong transcription Thymus Thymus
49 chr5:142669800-142680600 Strong transcription Adipose Nuclei Adipose
50 chr5:142669800-142681200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links