The 2.0 version of rSNPBase

Variant report

Variant rs2590570
Chromosome Location chr5:60221294-60221295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60167800-60228200 Weak transcription Psoas Muscle Psoas
2 chr5:60175800-60239400 Weak transcription NHEK skin
3 chr5:60177200-60239600 Weak transcription HSMMtube muscle
4 chr5:60177400-60232800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr5:60181600-60230800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr5:60183400-60228000 Weak transcription Small Intestine intestine
7 chr5:60187600-60223800 Weak transcription HUVEC blood vessel
8 chr5:60187600-60239600 Weak transcription Rectal Smooth Muscle rectum
9 chr5:60187800-60239600 Weak transcription Brain Angular Gyrus brain
10 chr5:60188000-60223400 Weak transcription Primary B cells from peripheral blood blood
11 chr5:60189400-60240000 Weak transcription Spleen Spleen
12 chr5:60189600-60224000 Weak transcription Osteobl bone
13 chr5:60189600-60239600 Weak transcription Right Ventricle heart
14 chr5:60189600-60240000 Weak transcription Pancreas Pancrea
15 chr5:60189800-60223600 Weak transcription Stomach Smooth Muscle stomach
16 chr5:60189800-60225000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr5:60189800-60225800 Weak transcription Fetal Brain Female brain
18 chr5:60190200-60224000 Weak transcription Brain Germinal Matrix brain
19 chr5:60191000-60227200 Weak transcription Fetal Intestine Small intestine
20 chr5:60191000-60232800 Weak transcription Fetal Stomach stomach
21 chr5:60193200-60227400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr5:60193200-60232800 Weak transcription Lung lung
23 chr5:60193200-60239800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr5:60194600-60222800 Weak transcription HMEC breast
25 chr5:60199600-60224400 Weak transcription Brain Hippocampus Middle brain
26 chr5:60201600-60229800 Weak transcription Brain Cingulate Gyrus brain
27 chr5:60201800-60225600 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr5:60202000-60223200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr5:60202000-60223400 Weak transcription H1 Cell Line embryonic stem cell
30 chr5:60202800-60223200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr5:60207600-60225400 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr5:60210800-60223800 Weak transcription Stomach Mucosa stomach
33 chr5:60211600-60223200 Weak transcription H9 Cell Line embryonic stem cell
34 chr5:60211800-60233400 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr5:60212000-60223000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr5:60212200-60223000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr5:60212400-60223200 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:60212800-60225200 Weak transcription Brain Inferior Temporal Lobe brain
39 chr5:60213000-60239800 Weak transcription Colonic Mucosa Colon
40 chr5:60213200-60233000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:60213200-60233200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr5:60213400-60222800 Weak transcription Fetal Intestine Large intestine
43 chr5:60213400-60223200 Weak transcription NH-A brain
44 chr5:60213400-60224000 Weak transcription NHDF-Ad bronchial
45 chr5:60213400-60232600 Weak transcription Muscle Satellite Cultured Cells --
46 chr5:60213400-60232800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:60213400-60239800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr5:60213600-60223200 Weak transcription Primary T cells fromperipheralblood blood
49 chr5:60213800-60239600 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr5:60214000-60227600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015