The 2.0 version of rSNPBase

Variant report

Variant rs2597945
Chromosome Location chr12:11267673-11267674
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11205800-11269200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:11239200-11283600 Weak transcription Fetal Thymus thymus
3 chr12:11245200-11286000 Weak transcription Ovary ovary
4 chr12:11251000-11276200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr12:11251200-11269800 Weak transcription H1 Cell Line embryonic stem cell
6 chr12:11252200-11274800 Weak transcription HSMM muscle
7 chr12:11253000-11283200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr12:11257400-11273000 Weak transcription Fetal Heart heart
9 chr12:11258600-11272800 Weak transcription Muscle Satellite Cultured Cells --
10 chr12:11258600-11273000 Weak transcription Osteobl bone
11 chr12:11258800-11272400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr12:11260000-11272800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr12:11260000-11297000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr12:11260200-11271800 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr12:11260600-11270000 Weak transcription Fetal Kidney kidney
16 chr12:11261400-11277600 Weak transcription Liver Liver
17 chr12:11262000-11274800 Weak transcription Right Ventricle heart
18 chr12:11262200-11270000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr12:11262200-11296400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr12:11262200-11296800 Weak transcription Thymus Thymus
21 chr12:11262200-11314600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr12:11262400-11275000 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr12:11262600-11275200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr12:11262800-11318200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr12:11263000-11271000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr12:11263600-11272600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:11265000-11279600 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr12:11265400-11275600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr12:11265400-11297200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr12:11265800-11284000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr12:11266400-11296800 Weak transcription Primary T cells fromperipheralblood blood
32 chr12:11267000-11268000 ZNF genes & repeats Dnd41 blood
33 chr12:11267200-11269400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr12:11267200-11271000 Weak transcription Fetal Intestine Small intestine
35 chr12:11267200-11272800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr12:11267200-11276600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:11267200-11276600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr12:11267200-11281600 Weak transcription Fetal Stomach stomach
39 chr12:11267400-11268200 ZNF genes & repeats A549 lung
40 chr12:11267400-11275400 Weak transcription Psoas Muscle Psoas
41 chr12:11267400-11275600 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr12:11267600-11267800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr12:11267600-11267800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr12:11267600-11273200 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr12:11267600-11275200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr12:11267600-11276400 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015