Variant report

Variant rs2597950
Chromosome Location chr12:11262955-11262956
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11205800-11269200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:11239200-11283600 Weak transcription Fetal Thymus thymus
3 chr12:11245200-11286000 Weak transcription Ovary ovary
4 chr12:11251000-11276200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr12:11251200-11269800 Weak transcription H1 Cell Line embryonic stem cell
6 chr12:11251800-11263200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr12:11252200-11274800 Weak transcription HSMM muscle
8 chr12:11253000-11265200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:11253000-11283200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:11254000-11267000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr12:11257200-11265000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr12:11257400-11273000 Weak transcription Fetal Heart heart
13 chr12:11258600-11272800 Weak transcription Muscle Satellite Cultured Cells --
14 chr12:11258600-11273000 Weak transcription Osteobl bone
15 chr12:11258800-11272400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr12:11259800-11264200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr12:11259800-11265000 Weak transcription HepG2 liver
18 chr12:11260000-11263200 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr12:11260000-11272800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr12:11260000-11297000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr12:11260200-11264200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr12:11260200-11264400 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr12:11260200-11271800 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr12:11260600-11270000 Weak transcription Fetal Kidney kidney
25 chr12:11260800-11263200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
26 chr12:11261000-11263000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
27 chr12:11261200-11264000 ZNF genes & repeats Fetal Muscle Leg muscle
28 chr12:11261400-11263000 Weak transcription Fetal Lung lung
29 chr12:11261400-11263400 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr12:11261400-11277600 Weak transcription Liver Liver
31 chr12:11261600-11263400 Weak transcription Fetal Intestine Large intestine
32 chr12:11261600-11267000 Weak transcription Lung lung
33 chr12:11261600-11267000 Weak transcription Psoas Muscle Psoas
34 chr12:11261800-11263000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr12:11261800-11263400 Enhancers Primary T helper cells PMA-I stimulated --
36 chr12:11261800-11264400 Weak transcription Dnd41 blood
37 chr12:11262000-11274800 Weak transcription Right Ventricle heart
38 chr12:11262200-11263200 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr12:11262200-11263200 Weak transcription A549 lung
40 chr12:11262200-11265400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr12:11262200-11267600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr12:11262200-11270000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr12:11262200-11296400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr12:11262200-11296800 Weak transcription Thymus Thymus
45 chr12:11262200-11314600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr12:11262400-11275000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr12:11262600-11263000 Strong transcription Primary hematopoietic stem cells blood
48 chr12:11262600-11263200 Weak transcription Primary B cells from peripheral blood blood
49 chr12:11262600-11263400 Weak transcription Primary B cells from cord blood blood
50 chr12:11262600-11275200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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