The 2.0 version of rSNPBase

Variant report

Variant rs2597971
Chromosome Location chr12:11253655-11253656
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11203800-11261200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr12:11205800-11269200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:11208600-11259600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr12:11218200-11256800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr12:11221200-11259600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr12:11225200-11261000 Weak transcription Fetal Stomach stomach
7 chr12:11234400-11261200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr12:11234400-11261400 Weak transcription Primary T cells fromperipheralblood blood
9 chr12:11237200-11256400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr12:11237200-11262200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr12:11239200-11283600 Weak transcription Fetal Thymus thymus
12 chr12:11239600-11261600 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr12:11239800-11261400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr12:11240200-11253800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr12:11241800-11259400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr12:11242000-11257200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr12:11244800-11261400 Weak transcription Primary B cells from peripheral blood blood
18 chr12:11245200-11286000 Weak transcription Ovary ovary
19 chr12:11249400-11255600 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr12:11249600-11261600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr12:11249800-11253800 Weak transcription Fetal Intestine Large intestine
22 chr12:11249800-11261600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr12:11250600-11255600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr12:11250800-11254000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr12:11251000-11256600 Weak transcription Fetal Lung lung
26 chr12:11251000-11276200 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr12:11251200-11259600 Weak transcription Thymus Thymus
28 chr12:11251200-11269800 Weak transcription H1 Cell Line embryonic stem cell
29 chr12:11251400-11259200 Weak transcription Primary B cells from cord blood blood
30 chr12:11251400-11259600 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr12:11251400-11260000 Weak transcription A549 lung
32 chr12:11251800-11263200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr12:11252000-11255400 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr12:11252000-11261400 Weak transcription Left Ventricle heart
35 chr12:11252200-11258800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr12:11252200-11274800 Weak transcription HSMM muscle
37 chr12:11252400-11259600 Weak transcription Primary monocytes fromperipheralblood blood
38 chr12:11252400-11261400 Weak transcription Psoas Muscle Psoas
39 chr12:11252600-11261200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr12:11252800-11261400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr12:11253000-11261000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr12:11253000-11265200 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr12:11253000-11283200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr12:11253200-11253800 Weak transcription Primary hematopoietic stem cells blood
45 chr12:11253200-11259000 Weak transcription Liver Liver
46 chr12:11253400-11256400 Weak transcription Dnd41 blood
47 chr12:11253600-11253800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015