The 2.0 version of rSNPBase

Variant report

Variant rs2599404
Chromosome Location chr12:11286088-11286089
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11260000-11297000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:11262200-11296400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr12:11262200-11296800 Weak transcription Thymus Thymus
4 chr12:11262200-11314600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr12:11262800-11318200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr12:11265400-11297200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr12:11266400-11296800 Weak transcription Primary T cells fromperipheralblood blood
8 chr12:11267800-11286400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr12:11268600-11312600 Weak transcription Hela-S3 cervix
10 chr12:11270400-11323200 Weak transcription Fetal Kidney kidney
11 chr12:11272400-11286200 Weak transcription NHEK skin
12 chr12:11273400-11297200 Weak transcription HUVEC blood vessel
13 chr12:11273800-11321800 Weak transcription Osteobl bone
14 chr12:11275000-11287200 Weak transcription Fetal Brain Male brain
15 chr12:11276400-11295800 Weak transcription Fetal Intestine Large intestine
16 chr12:11276800-11292200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr12:11276800-11303600 Weak transcription HSMM muscle
18 chr12:11276800-11311800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr12:11277000-11286200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr12:11277000-11296000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr12:11277000-11297600 Weak transcription H1 Cell Line embryonic stem cell
22 chr12:11278000-11294400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr12:11278200-11294400 Weak transcription A549 lung
24 chr12:11278600-11297000 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr12:11279400-11286200 Weak transcription HMEC breast
26 chr12:11279400-11311800 Weak transcription HepG2 liver
27 chr12:11279600-11286400 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr12:11279800-11294400 Weak transcription Primary B cells from peripheral blood blood
29 chr12:11280000-11293000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr12:11280000-11295600 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr12:11280200-11287000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr12:11280200-11291800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr12:11280200-11294400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr12:11280200-11296400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr12:11281400-11296600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr12:11282000-11286200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr12:11282000-11291400 Weak transcription Fetal Intestine Small intestine
38 chr12:11282000-11297000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr12:11282000-11303600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr12:11282200-11286200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr12:11282200-11294400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr12:11282200-11294400 Weak transcription Fetal Stomach stomach
43 chr12:11282200-11303400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr12:11282400-11292000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr12:11282400-11292000 Weak transcription Fetal Lung lung
46 chr12:11282400-11293200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr12:11282400-11294800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:11282400-11295400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr12:11282400-11318200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr12:11282600-11294400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015