Variant report
| Variant | rs2600362 |
|---|---|
| Chromosome Location | chr12:11282252-11282253 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:11239200-11283600 | Weak transcription | Fetal Thymus | thymus |
| 2 | chr12:11245200-11286000 | Weak transcription | Ovary | ovary |
| 3 | chr12:11253000-11283200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 4 | chr12:11260000-11297000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr12:11262200-11296400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 6 | chr12:11262200-11296800 | Weak transcription | Thymus | Thymus |
| 7 | chr12:11262200-11314600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr12:11262800-11318200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 9 | chr12:11265400-11297200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr12:11265800-11284000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr12:11266400-11296800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 12 | chr12:11267800-11286400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 13 | chr12:11268600-11283000 | Weak transcription | Left Ventricle | heart |
| 14 | chr12:11268600-11312600 | Weak transcription | Hela-S3 | cervix |
| 15 | chr12:11270400-11286000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr12:11270400-11323200 | Weak transcription | Fetal Kidney | kidney |
| 17 | chr12:11271000-11283000 | Weak transcription | HSMMtube | muscle |
| 18 | chr12:11271200-11282400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 19 | chr12:11271200-11285000 | Weak transcription | Adipose Nuclei | Adipose |
| 20 | chr12:11272400-11286200 | Weak transcription | NHEK | skin |
| 21 | chr12:11273400-11297200 | Weak transcription | HUVEC | blood vessel |
| 22 | chr12:11273800-11321800 | Weak transcription | Osteobl | bone |
| 23 | chr12:11275000-11287200 | Weak transcription | Fetal Brain Male | brain |
| 24 | chr12:11276400-11283200 | Weak transcription | Aorta | Aorta |
| 25 | chr12:11276400-11295800 | Weak transcription | Fetal Intestine Large | intestine |
| 26 | chr12:11276800-11292200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 27 | chr12:11276800-11303600 | Weak transcription | HSMM | muscle |
| 28 | chr12:11276800-11311800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 29 | chr12:11277000-11286200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 30 | chr12:11277000-11296000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr12:11277000-11297600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 32 | chr12:11277400-11283200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 33 | chr12:11278000-11294400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 34 | chr12:11278200-11294400 | Weak transcription | A549 | lung |
| 35 | chr12:11278600-11297000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 36 | chr12:11279000-11284000 | Strong transcription | Primary hematopoietic stem cells | blood |
| 37 | chr12:11279200-11283200 | Weak transcription | Brain Substantia Nigra | brain |
| 38 | chr12:11279200-11284200 | Strong transcription | Primary B cells from cord blood | blood |
| 39 | chr12:11279400-11283200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 40 | chr12:11279400-11286200 | Weak transcription | HMEC | breast |
| 41 | chr12:11279400-11311800 | Weak transcription | HepG2 | liver |
| 42 | chr12:11279600-11286400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr12:11279800-11283000 | Weak transcription | Brain Anterior Caudate | brain |
| 44 | chr12:11279800-11294400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 45 | chr12:11280000-11282600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr12:11280000-11293000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 47 | chr12:11280000-11295600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 48 | chr12:11280200-11287000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr12:11280200-11291800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 50 | chr12:11280200-11294400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
