The 2.0 version of rSNPBase

Variant report

Variant rs2600369
Chromosome Location chr12:11276037-11276038
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11239200-11283600 Weak transcription Fetal Thymus thymus
2 chr12:11245200-11286000 Weak transcription Ovary ovary
3 chr12:11251000-11276200 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr12:11253000-11283200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr12:11260000-11297000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr12:11261400-11277600 Weak transcription Liver Liver
7 chr12:11262200-11296400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr12:11262200-11296800 Weak transcription Thymus Thymus
9 chr12:11262200-11314600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:11262800-11318200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr12:11265000-11279600 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr12:11265400-11297200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr12:11265800-11284000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr12:11266400-11296800 Weak transcription Primary T cells fromperipheralblood blood
15 chr12:11267200-11276600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr12:11267200-11276600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr12:11267200-11281600 Weak transcription Fetal Stomach stomach
18 chr12:11267600-11276400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:11267800-11286400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr12:11268000-11276600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr12:11268200-11281800 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr12:11268600-11283000 Weak transcription Left Ventricle heart
23 chr12:11268600-11312600 Weak transcription Hela-S3 cervix
24 chr12:11269400-11279200 Weak transcription Primary B cells from cord blood blood
25 chr12:11270400-11278800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr12:11270400-11286000 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr12:11270400-11323200 Weak transcription Fetal Kidney kidney
28 chr12:11270600-11282000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr12:11270800-11276200 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr12:11271000-11276800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr12:11271000-11283000 Weak transcription HSMMtube muscle
32 chr12:11271200-11281600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr12:11271200-11282400 Weak transcription Stomach Smooth Muscle stomach
34 chr12:11271200-11285000 Weak transcription Adipose Nuclei Adipose
35 chr12:11271400-11277400 Weak transcription Fetal Intestine Small intestine
36 chr12:11271400-11281200 Weak transcription Placenta Placenta
37 chr12:11271600-11276200 Weak transcription Primary B cells from peripheral blood blood
38 chr12:11272000-11277200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr12:11272000-11281000 Weak transcription NH-A brain
40 chr12:11272400-11278000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr12:11272400-11281800 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr12:11272400-11286200 Weak transcription NHEK skin
43 chr12:11273200-11276600 Weak transcription Fetal Lung lung
44 chr12:11273400-11297200 Weak transcription HUVEC blood vessel
45 chr12:11273600-11276600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr12:11273600-11281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr12:11273800-11276600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr12:11273800-11280400 Weak transcription Muscle Satellite Cultured Cells --
49 chr12:11273800-11321800 Weak transcription Osteobl bone
50 chr12:11274000-11276400 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015