Variant report

Variant rs2623277
Chromosome Location chr15:52211478-52211479
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52177200-52213600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr15:52178800-52216600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr15:52179800-52218600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr15:52180400-52218200 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr15:52181200-52221000 Strong transcription Primary monocytes fromperipheralblood blood
7 chr15:52183200-52223000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr15:52186400-52219000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr15:52187800-52212000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr15:52191000-52222800 Weak transcription H9 Cell Line embryonic stem cell
11 chr15:52192800-52213600 Weak transcription Brain Cingulate Gyrus brain
12 chr15:52193400-52227800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr15:52193400-52232800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr15:52193600-52233600 Weak transcription Fetal Brain Male brain
15 chr15:52193800-52216200 Weak transcription Brain Hippocampus Middle brain
16 chr15:52194200-52228200 Weak transcription H1 Cell Line embryonic stem cell
17 chr15:52194200-52231600 Weak transcription Psoas Muscle Psoas
18 chr15:52194400-52236800 Weak transcription Fetal Kidney kidney
19 chr15:52194400-52239000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr15:52196200-52234000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr15:52197000-52234200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr15:52197000-52234800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr15:52198400-52219000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr15:52200000-52213800 Weak transcription NHLF lung
25 chr15:52200200-52213000 Weak transcription Gastric stomach
26 chr15:52200400-52213600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr15:52200400-52220800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr15:52200400-52262200 Weak transcription Stomach Mucosa stomach
29 chr15:52200600-52213600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr15:52200600-52213600 Weak transcription HUVEC blood vessel
31 chr15:52201000-52216200 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr15:52201000-52238800 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr15:52201200-52215600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr15:52201400-52217800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:52201800-52223000 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr15:52202000-52230000 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr15:52203000-52212200 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr15:52204400-52217800 Strong transcription Fetal Intestine Small intestine
39 chr15:52204600-52218400 Strong transcription Duodenum Mucosa Duodenum
40 chr15:52204600-52224600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr15:52204800-52218800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr15:52204800-52219400 Strong transcription Sigmoid Colon Sigmoid Colon
43 chr15:52204800-52238800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr15:52205200-52215400 Weak transcription NH-A brain
45 chr15:52205800-52211600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr15:52206000-52215400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:52206600-52215400 Weak transcription HepG2 liver
48 chr15:52206600-52218400 Strong transcription Primary B cells from peripheral blood blood
49 chr15:52207400-52219600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr15:52207600-52215800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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