Variant report

Variant rs2623287
Chromosome Location chr15:52226056-52226057
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:52193400-52227800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr15:52193400-52232800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr15:52193600-52233600 Weak transcription Fetal Brain Male brain
5 chr15:52194200-52228200 Weak transcription H1 Cell Line embryonic stem cell
6 chr15:52194200-52231600 Weak transcription Psoas Muscle Psoas
7 chr15:52194400-52236800 Weak transcription Fetal Kidney kidney
8 chr15:52194400-52239000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr15:52196200-52234000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr15:52197000-52234200 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr15:52197000-52234800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr15:52200400-52262200 Weak transcription Stomach Mucosa stomach
13 chr15:52201000-52238800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr15:52202000-52230000 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr15:52204800-52238800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr15:52210000-52233600 Weak transcription Rectal Smooth Muscle rectum
17 chr15:52210000-52239000 Weak transcription Colon Smooth Muscle Colon
18 chr15:52211200-52230400 Weak transcription K562 blood
19 chr15:52211600-52228800 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr15:52211600-52237600 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr15:52211600-52239200 Weak transcription Right Ventricle heart
22 chr15:52212400-52241600 Weak transcription Small Intestine intestine
23 chr15:52214000-52226200 Weak transcription Ovary ovary
24 chr15:52215200-52234000 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr15:52215800-52226200 Weak transcription Fetal Brain Female brain
26 chr15:52216000-52229600 Weak transcription Colonic Mucosa Colon
27 chr15:52216000-52238600 Weak transcription Pancreas Pancrea
28 chr15:52216200-52227400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr15:52216400-52229600 Weak transcription HSMMtube muscle
30 chr15:52216400-52234200 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr15:52217000-52227200 Weak transcription Brain Germinal Matrix brain
32 chr15:52217000-52231600 Weak transcription Brain Hippocampus Middle brain
33 chr15:52217200-52226600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr15:52217200-52227600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr15:52217200-52227800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr15:52217200-52228400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr15:52217200-52231600 Weak transcription Brain Substantia Nigra brain
38 chr15:52217200-52238400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr15:52217200-52238800 Weak transcription Brain Angular Gyrus brain
40 chr15:52217600-52234200 Weak transcription NHLF lung
41 chr15:52217600-52238800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr15:52217800-52227800 Weak transcription Fetal Intestine Large intestine
43 chr15:52217800-52228000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr15:52217800-52228200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr15:52217800-52228600 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr15:52217800-52237400 Weak transcription Aorta Aorta
47 chr15:52217800-52237400 Weak transcription Brain Anterior Caudate brain
48 chr15:52217800-52239000 Weak transcription Gastric stomach
49 chr15:52218000-52226200 Weak transcription Left Ventricle heart
50 chr15:52218000-52228400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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