The 2.0 version of rSNPBase

Variant report

Variant rs2640519
Chromosome Location chr12:51532711-51532712
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477800-51550200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr12:51503200-51560200 Weak transcription Right Ventricle heart
3 chr12:51504800-51563400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr12:51507800-51539800 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr12:51508000-51543000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr12:51510200-51536200 Weak transcription Brain Hippocampus Middle brain
7 chr12:51510200-51554400 Weak transcription K562 blood
8 chr12:51511400-51558800 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr12:51512800-51535600 Weak transcription Brain Cingulate Gyrus brain
10 chr12:51513000-51565400 Weak transcription Fetal Lung lung
11 chr12:51517200-51547600 Weak transcription Fetal Kidney kidney
12 chr12:51517200-51554600 Weak transcription HepG2 liver
13 chr12:51519000-51533800 Weak transcription Gastric stomach
14 chr12:51519000-51541000 Weak transcription Brain Substantia Nigra brain
15 chr12:51519000-51561600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr12:51519000-51565000 Weak transcription Colon Smooth Muscle Colon
17 chr12:51519000-51565200 Weak transcription Left Ventricle heart
18 chr12:51519000-51565200 Weak transcription Pancreas Pancrea
19 chr12:51519000-51565800 Weak transcription Esophagus oesophagus
20 chr12:51519200-51533800 Weak transcription Spleen Spleen
21 chr12:51519200-51534000 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr12:51519200-51535400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr12:51519200-51537800 Weak transcription Liver Liver
24 chr12:51519200-51540000 Weak transcription Thymus Thymus
25 chr12:51519200-51542000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr12:51519200-51544400 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr12:51519200-51544600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr12:51519200-51554600 Weak transcription NHDF-Ad bronchial
29 chr12:51519200-51559600 Weak transcription Lung lung
30 chr12:51519200-51563800 Weak transcription Fetal Brain Female brain
31 chr12:51519200-51565000 Weak transcription Stomach Smooth Muscle stomach
32 chr12:51519400-51550200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr12:51519400-51565200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr12:51521200-51532800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr12:51521200-51535800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr12:51521400-51533600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr12:51521400-51534600 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr12:51521600-51541800 Weak transcription NHLF lung
39 chr12:51521600-51565200 Weak transcription HSMM muscle
40 chr12:51521800-51538400 Weak transcription HMEC breast
41 chr12:51523000-51535600 Weak transcription NH-A brain
42 chr12:51523200-51535600 Weak transcription Brain Germinal Matrix brain
43 chr12:51523400-51533400 Weak transcription Osteobl bone
44 chr12:51523600-51544400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr12:51526000-51558800 Weak transcription GM12878-XiMat blood
46 chr12:51526400-51538600 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr12:51526800-51542600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr12:51526800-51556400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr12:51527200-51541000 Weak transcription Muscle Satellite Cultured Cells --
50 chr12:51527200-51542200 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015