Variant report

Variant rs2641977
Chromosome Location chr9:567531-567532
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-569400 Weak transcription Esophagus oesophagus
2 chr9:547600-571200 Weak transcription Aorta Aorta
3 chr9:549800-569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:549800-593800 Weak transcription Lung lung
5 chr9:552400-574000 Weak transcription Right Ventricle heart
6 chr9:555000-568400 Weak transcription Pancreas Pancrea
7 chr9:555400-568400 Weak transcription Left Ventricle heart
8 chr9:559000-571000 Weak transcription Psoas Muscle Psoas
9 chr9:559000-573600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr9:561800-570000 Weak transcription Fetal Lung lung
11 chr9:563000-572600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr9:563400-568400 Weak transcription Colonic Mucosa Colon
13 chr9:564000-569400 Weak transcription Brain Substantia Nigra brain
14 chr9:564600-567800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr9:564600-569600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr9:564600-571000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr9:564800-568600 Enhancers Primary B cells from peripheral blood blood
18 chr9:565800-571000 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr9:565800-571000 Weak transcription NHEK skin
20 chr9:565800-573800 Weak transcription HMEC breast
21 chr9:565800-574000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr9:566200-569600 Weak transcription A549 lung
23 chr9:566600-571000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr9:566600-573800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr9:567000-573000 Enhancers Fetal Intestine Large intestine
26 chr9:567200-567600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
27 chr9:567200-568000 Enhancers Primary monocytes fromperipheralblood blood
28 chr9:567200-568200 Enhancers Primary B cells from cord blood blood
29 chr9:567200-569400 Enhancers Duodenum Mucosa Duodenum
30 chr9:567200-571800 Enhancers Liver Liver
31 chr9:567200-572400 Enhancers Fetal Intestine Small intestine
32 chr9:567400-567600 Enhancers GM12878-XiMat blood
33 chr9:567400-567800 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr9:567400-567800 Enhancers Brain Cingulate Gyrus brain
35 chr9:567400-567800 Enhancers Brain Hippocampus Middle brain
36 chr9:567400-568000 Enhancers HepG2 liver
37 chr9:567400-568600 Enhancers Primary T cells from cord blood blood
38 chr9:567400-568600 Enhancers Stomach Mucosa stomach
39 chr9:567400-569800 Enhancers Fetal Heart heart

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