Variant report

Variant rs2641991
Chromosome Location chr9:550484-550485
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-557000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:546600-569400 Weak transcription Esophagus oesophagus
3 chr9:547000-552000 Weak transcription Ovary ovary
4 chr9:547200-551000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr9:547200-552200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr9:547200-557800 Weak transcription Placenta Placenta
7 chr9:547400-551200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr9:547400-557600 Weak transcription H1 Cell Line embryonic stem cell
9 chr9:547600-550600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr9:547600-552600 Weak transcription Adipose Nuclei Adipose
11 chr9:547600-555000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr9:547600-557600 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr9:547600-571200 Weak transcription Aorta Aorta
14 chr9:547800-552000 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr9:547800-556400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr9:547800-556800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr9:547800-563000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr9:548200-551200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr9:548200-552000 Weak transcription Brain Substantia Nigra brain
20 chr9:548200-560400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr9:548400-552200 Weak transcription Brain Anterior Caudate brain
22 chr9:549000-552200 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr9:549200-550600 Genic enhancers Fetal Heart heart
24 chr9:549200-550600 Enhancers Fetal Muscle Trunk muscle
25 chr9:549200-550600 Enhancers Gastric stomach
26 chr9:549200-550600 Genic enhancers Left Ventricle heart
27 chr9:549200-550800 Genic enhancers Fetal Muscle Leg muscle
28 chr9:549200-551000 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr9:549200-551200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr9:549200-551600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr9:549600-557600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr9:549600-557800 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr9:549800-550600 Enhancers Pancreas Pancrea
34 chr9:549800-552000 Weak transcription Brain Cingulate Gyrus brain
35 chr9:549800-552000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr9:549800-552000 Weak transcription Fetal Lung lung
37 chr9:549800-552200 Weak transcription Spleen Spleen
38 chr9:549800-557800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr9:549800-558000 Weak transcription Brain Angular Gyrus brain
40 chr9:549800-569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr9:549800-593800 Weak transcription Lung lung
42 chr9:550000-550800 Enhancers Rectal Mucosa Donor 31 rectum
43 chr9:550000-551000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr9:550000-551000 Weak transcription Brain Hippocampus Middle brain
45 chr9:550000-551000 Weak transcription Right Ventricle heart
46 chr9:550000-551600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr9:550000-551600 Weak transcription A549 lung
48 chr9:550000-551600 Weak transcription NHEK skin
49 chr9:550000-552000 Weak transcription Right Atrium heart
50 chr9:550000-552200 Weak transcription Fetal Kidney kidney

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