Variant report

Variant rs2662912
Chromosome Location chr1:225068515-225068516
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225061200-225068800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:225063000-225071600 Weak transcription Ovary ovary
3 chr1:225063600-225069800 Weak transcription Liver Liver
4 chr1:225064000-225069200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:225066200-225068600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:225066400-225068600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:225066400-225069200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:225066400-225070600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:225066600-225068800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:225066600-225068800 Enhancers HSMMtube muscle
11 chr1:225066800-225068800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:225066800-225069600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:225067000-225069200 Enhancers Fetal Intestine Small intestine
14 chr1:225067000-225069800 Enhancers HUES48 Cell Line embryonic stem cell
15 chr1:225067000-225073000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:225067200-225068600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:225067200-225068800 Enhancers A549 lung
18 chr1:225067200-225070000 Enhancers H1 Cell Line embryonic stem cell
19 chr1:225067200-225070000 Enhancers H9 Cell Line embryonic stem cell
20 chr1:225067400-225068600 Weak transcription Fetal Lung lung
21 chr1:225067400-225071800 Weak transcription Rectal Smooth Muscle rectum
22 chr1:225067600-225068600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:225067800-225068600 Enhancers Fetal Stomach stomach
24 chr1:225067800-225068800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:225067800-225069200 Enhancers Fetal Intestine Large intestine
26 chr1:225067800-225069600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:225068000-225068600 Active TSS ES-WA7 Cell Line embryonic stem cell
28 chr1:225068000-225068800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:225068000-225068800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
30 chr1:225068200-225068600 Active TSS ES-I3 Cell Line embryonic stem cell
31 chr1:225068200-225068600 Active TSS iPS-20b Cell Line embryonic stem cell
32 chr1:225068200-225069200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:225068200-225069800 Weak transcription HSMM muscle
34 chr1:225068200-225070000 Enhancers iPS-15b Cell Line embryonic stem cell
35 chr1:225068200-225071400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:225068400-225068600 Enhancers HUES6 Cell Line embryonic stem cell
37 chr1:225068400-225068600 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr1:225068400-225068800 Flanking Active TSS HepG2 liver
39 chr1:225068400-225069000 Enhancers Rectal Mucosa Donor 31 rectum

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