Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:50032130..50034951-chr8:50036647..50039869,3	K562	blood:
2	chr8:50036565..50039449-chr8:50040680..50044061,3	K562	blood:
3	chr8:50031366..50035096-chr8:50036647..50040169,3	K562	blood:
4	chr8:50029029..50031186-chr8:50035515..50038037,2	K562	blood:
5	chr8:50037357..50040620-chr8:50040803..50044061,4	K562	blood:
6	chr8:49957733..49959287-chr8:50036754..50039574,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10448011	0.87[EUR][1000 genomes]
rs12056729	0.87[EUR][1000 genomes]
rs12550346	0.84[EUR][1000 genomes]
rs12674652	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13248468	0.87[EUR][1000 genomes]
rs13250382	0.83[EUR][1000 genomes]
rs13278300	0.85[EUR][1000 genomes]
rs16922692	0.81[AMR][1000 genomes]
rs16939396	0.83[EUR][1000 genomes]
rs16939398	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16939408	0.83[EUR][1000 genomes]
rs16939444	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16939445	0.85[EUR][1000 genomes]
rs1876718	0.85[EUR][1000 genomes]
rs2891720	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs33961425	0.81[AMR][1000 genomes]
rs34381258	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3735973	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs4510886	0.87[EUR][1000 genomes]
rs4873311	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4873316	0.87[EUR][1000 genomes]
rs59888224	0.87[EUR][1000 genomes]
rs72640596	0.83[AFR][1000 genomes]
rs9650217	0.86[JPT][hapmap];0.83[AFR][1000 genomes];0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025068	chr8:49953397-50370208	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv1023325	chr8:49994793-50050571	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv1793350	chr8:50013702-50102628	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1034908	chr8:50023423-50416049	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv539601	chr8:50023423-50416049	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1024410	chr8:50037085-50511501	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50037600-50038000	Enhancers	K562	blood

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