Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10064251	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10072317	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10463227	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11135387	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1471289	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs187931	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2343708	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs269700	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs269701	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs269702	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs269703	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs269704	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs269705	0.90[ASN][1000 genomes]
rs269706	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs269707	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4869111	0.83[EUR][1000 genomes]
rs4869195	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6420123	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs898597	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9314085	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs984645	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830400	chr5:92515026-92738896	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv968103	chr5:92702701-92707953	Enhancers	n/a	n/a	inside rSNPs	diseases
3	nsv830402	chr5:92703901-92847345	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92707200-92708200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr5:92707600-92708000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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