Variant report

Variant	rs2710157
Chromosome Location	chr7:147725495-147725496
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:147719801..147721661-chr7:147724450..147725973,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10240221	0.93[CHB][hapmap];0.93[JPT][hapmap]
rs10808049	0.93[CHB][hapmap];0.93[JPT][hapmap]
rs11771941	0.85[CHB][hapmap]
rs13237695	0.80[ASN][1000 genomes]
rs1541412	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs17432209	0.86[CHB][hapmap]
rs2178771	0.82[CEU][hapmap]
rs2527049	0.95[CEU][hapmap];0.92[CHB][hapmap];0.86[JPT][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2527051	0.92[CHB][hapmap];0.86[JPT][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2527054	0.84[CHB][hapmap]
rs2707553	0.86[CHB][hapmap]
rs2707560	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2707563	0.92[CHB][hapmap];0.86[JPT][hapmap];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2710075	0.80[CHB][hapmap]
rs2710132	0.92[CHB][hapmap];0.86[JPT][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2710135	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4571659	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4725757	0.86[CHB][hapmap];0.93[JPT][hapmap]
rs4725758	0.92[CHB][hapmap];0.93[JPT][hapmap];0.80[ASN][1000 genomes]
rs4726903	0.85[CHB][hapmap];0.93[JPT][hapmap]
rs4726912	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6942912	0.92[CHB][hapmap]
rs6946207	0.92[CHB][hapmap]
rs6949561	0.93[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6953539	0.85[CHB][hapmap];0.87[JPT][hapmap]
rs6969904	0.93[CHB][hapmap];0.87[JPT][hapmap];0.80[ASN][1000 genomes]
rs6970083	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs757696	0.93[CHB][hapmap];0.86[JPT][hapmap];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8180832	0.84[CHB][hapmap]
rs961519	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs993715	1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023913	chr7:147521075-147806318	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1026058	chr7:147521109-147783042	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv539179	chr7:147521109-147783042	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv934002	chr7:147521110-147807705	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1017610	chr7:147523752-147806427	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147724200-147726200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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