Variant report

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:34239384..34241409-chr17:34256754..34259638,2	K562	blood:
2	chr17:34239468..34241400-chr17:34243270..34245048,2	K562	blood:
3	chr17:34135830..34137853-chr17:34239642..34242646,3	K562	blood:
4	chr17:34232786..34236982-chr17:34237084..34241613,5	K562	blood:
5	chr17:34233334..34236285-chr17:34238757..34241613,2	K562	blood:
6	chr17:34136040..34139030-chr17:34239642..34241890,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RDM1-1	chr17:34239639-34245014	NONHSAT053145

No data

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1065341	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs16963927	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs16971570	0.88[EUR][1000 genomes]
rs16971585	0.90[EUR][1000 genomes]
rs16971600	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs16971620	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs16971624	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs2702965	0.92[ASN][1000 genomes]
rs2735479	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2735480	0.83[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2735483	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28912069	0.95[EUR][1000 genomes]
rs28914812	0.95[EUR][1000 genomes]
rs28914818	0.88[EUR][1000 genomes]
rs4251776	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs4251785	0.90[JPT][hapmap]
rs59536691	0.95[EUR][1000 genomes]
rs61590868	0.95[EUR][1000 genomes]
rs7209512	1.00[CEU][hapmap]
rs7224965	0.93[EUR][1000 genomes]
rs8073456	1.00[CEU][hapmap]
rs965984	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs9674851	1.00[CEU][hapmap]
rs9895464	1.00[CEU][hapmap]
rs9898128	1.00[CEU][hapmap]
rs9914929	1.00[CEU][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:34230000-34245400	Weak transcription	Primary T cells from cord blood	blood
2	chr17:34234600-34244400	Weak transcription	Thymus	Thymus
3	chr17:34234600-34251200	Weak transcription	Fetal Thymus	thymus
4	chr17:34238400-34242400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr17:34239400-34243400	Enhancers	Liver	Liver
6	chr17:34239600-34244200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr17:34239800-34242600	Enhancers	HepG2	liver
8	chr17:34240000-34242000	Enhancers	Primary T cells fromperipheralblood	blood
9	chr17:34240200-34244200	Enhancers	Fetal Intestine Small	intestine
10	chr17:34240200-34245600	Enhancers	K562	blood
11	chr17:34240600-34241400	Enhancers	Small Intestine	intestine
12	chr17:34240600-34244000	Enhancers	Fetal Intestine Large	intestine
13	chr17:34241200-34242400	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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