Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs17054846	1.00[EUR][1000 genomes]
rs17054878	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17054935	1.00[EUR][1000 genomes]
rs17054941	1.00[EUR][1000 genomes]
rs17055207	0.86[EUR][1000 genomes]
rs17055257	0.86[EUR][1000 genomes]
rs17055503	0.86[EUR][1000 genomes]
rs1885768	0.86[EUR][1000 genomes]
rs1909652	1.00[EUR][1000 genomes]
rs2759680	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2759681	1.00[EUR][1000 genomes]
rs2759691	1.00[EUR][1000 genomes]
rs2759696	1.00[EUR][1000 genomes]
rs2759697	1.00[EUR][1000 genomes]
rs2759701	1.00[EUR][1000 genomes]
rs2806990	1.00[EUR][1000 genomes]
rs2806992	1.00[EUR][1000 genomes]
rs2806998	1.00[EUR][1000 genomes]
rs2807007	1.00[CEU][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35422016	0.86[EUR][1000 genomes]
rs7984449	1.00[EUR][1000 genomes]
rs7996399	1.00[EUR][1000 genomes]
rs7997868	1.00[EUR][1000 genomes]
rs8001825	1.00[EUR][1000 genomes]
rs877482	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050969	chr13:53665927-54064861	Bivalent Enhancer Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:53731400-53741800	Weak transcription	Fetal Brain Male	brain

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