Variant report

Variant	rs2761115
Chromosome Location	chr9:15146712-15146713
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1746333	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831519	chr9:15018160-15209127	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1019567	chr9:15031398-15159409	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15137200-15156000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr9:15137400-15147000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr9:15138800-15146800	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr9:15141000-15154400	Weak transcription	Fetal Stomach	stomach
5	chr9:15145000-15150600	Weak transcription	HMEC	breast
6	chr9:15145800-15147000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr9:15145800-15147200	Enhancers	Fetal Brain Male	brain
8	chr9:15145800-15147400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr9:15146200-15147200	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr9:15146400-15146800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr9:15146400-15146800	Enhancers	Brain Hippocampus Middle	brain
12	chr9:15146400-15146800	Enhancers	Fetal Thymus	thymus
13	chr9:15146400-15147000	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr9:15146400-15147000	Flanking Active TSS	Brain Germinal Matrix	brain
15	chr9:15146400-15147200	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr9:15146600-15146800	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr9:15146600-15146800	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr9:15146600-15146800	Enhancers	iPS-20b Cell Line	embryonic stem cell
19	chr9:15146600-15147000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
20	chr9:15146600-15147000	Flanking Active TSS	Fetal Brain Female	brain
21	chr9:15146600-15147200	Enhancers	H1 Cell Line	embryonic stem cell
22	chr9:15146600-15147200	Enhancers	H9 Cell Line	embryonic stem cell
23	chr9:15146600-15147200	Enhancers	Fetal Kidney	kidney
24	chr9:15146600-15147200	Enhancers	Pancreatic Islets	Pancreatic Islet
25	chr9:15146600-15147800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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