Variant report

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs11920473	0.90[JPT][hapmap]
rs12495193	0.80[EUR][1000 genomes]
rs1492886	0.90[JPT][hapmap]
rs1675838	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17202181	0.80[EUR][1000 genomes]
rs188008	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2029660	0.91[JPT][hapmap]
rs2126221	0.83[EUR][1000 genomes]
rs2131369	0.91[JPT][hapmap]
rs2372904	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2372908	0.91[JPT][hapmap]
rs276122	0.88[ASN][1000 genomes]
rs276125	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs276128	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3772914	0.91[JPT][hapmap]
rs3821554	0.91[JPT][hapmap]
rs4362742	0.90[JPT][hapmap]
rs6548768	0.91[JPT][hapmap]
rs6548769	0.91[JPT][hapmap]
rs6785616	0.91[JPT][hapmap]
rs6785735	0.91[JPT][hapmap]
rs6790522	0.80[EUR][1000 genomes]
rs6792379	0.91[JPT][hapmap]
rs6800135	0.91[JPT][hapmap]
rs7621067	0.90[JPT][hapmap]
rs820268	0.91[JPT][hapmap]
rs820269	0.91[JPT][hapmap]
rs820270	0.91[JPT][hapmap]
rs820273	0.91[JPT][hapmap]
rs843940	0.91[JPT][hapmap]
rs846	0.89[JPT][hapmap]
rs9309872	0.91[JPT][hapmap]
rs9309875	0.90[JPT][hapmap]
rs9681347	0.91[JPT][hapmap]
rs9814053	0.91[JPT][hapmap]
rs9819406	0.88[JPT][hapmap]
rs9835378	0.91[JPT][hapmap]
rs9846154	0.91[JPT][hapmap]
rs9869348	0.91[JPT][hapmap]
rs9871153	0.91[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934018	chr3:81413060-81655338	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv933756	chr3:81413060-81754738	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1003217	chr3:81435044-81752521	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:81476000-81481400	Weak transcription	NHDF-Ad	bronchial
2	chr3:81476000-81481600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:81476400-81478200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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