Variant report

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs11920473	1.00[JPT][hapmap]
rs12495193	0.80[EUR][1000 genomes]
rs1492886	1.00[JPT][hapmap]
rs1675838	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17202181	0.80[EUR][1000 genomes]
rs188008	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2029660	1.00[JPT][hapmap]
rs2126221	0.83[EUR][1000 genomes]
rs2131369	1.00[JPT][hapmap]
rs2372904	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2372908	1.00[JPT][hapmap]
rs276114	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs276122	0.88[ASN][1000 genomes]
rs276128	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3772914	1.00[JPT][hapmap]
rs3821554	1.00[JPT][hapmap]
rs4362742	1.00[JPT][hapmap]
rs6548768	1.00[JPT][hapmap]
rs6548769	1.00[JPT][hapmap]
rs6785616	1.00[JPT][hapmap]
rs6785735	1.00[JPT][hapmap]
rs6790522	0.80[EUR][1000 genomes]
rs6792379	1.00[JPT][hapmap]
rs6800135	1.00[JPT][hapmap]
rs7621067	1.00[JPT][hapmap]
rs820268	1.00[JPT][hapmap]
rs820269	1.00[JPT][hapmap]
rs820270	1.00[JPT][hapmap]
rs820273	1.00[JPT][hapmap];0.85[YRI][hapmap]
rs843940	1.00[JPT][hapmap]
rs846	1.00[JPT][hapmap];0.84[YRI][hapmap]
rs9309872	1.00[JPT][hapmap]
rs9309875	1.00[JPT][hapmap]
rs9681347	1.00[JPT][hapmap]
rs9814053	1.00[JPT][hapmap]
rs9819406	1.00[JPT][hapmap]
rs9835378	1.00[JPT][hapmap]
rs9846154	1.00[JPT][hapmap]
rs9869348	1.00[JPT][hapmap]
rs9871153	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934018	chr3:81413060-81655338	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv933756	chr3:81413060-81754738	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1003217	chr3:81435044-81752521	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:81486800-81503200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:81487200-81492200	Weak transcription	Right Atrium	heart

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