The 2.0 version of rSNPBase

Variant report

Variant rs2774940
Chromosome Location chr1:93311761-93311762
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93300400-93316000 Strong transcription Primary B cells from cord blood blood
2 chr1:93301000-93318400 Strong transcription Primary B cells from peripheral blood blood
3 chr1:93303000-93317200 Weak transcription Right Ventricle heart
4 chr1:93304200-93312200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:93304400-93349000 Weak transcription Aorta Aorta
6 chr1:93305000-93312000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:93305200-93317200 Weak transcription Fetal Heart heart
8 chr1:93305800-93316200 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:93306000-93311800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:93306000-93312000 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr1:93306000-93316800 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr1:93306000-93317200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:93306400-93312200 Strong transcription Primary T cells fromperipheralblood blood
14 chr1:93306400-93313800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:93306400-93317200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:93306600-93317400 Weak transcription Brain Angular Gyrus brain
17 chr1:93306800-93324800 Weak transcription Pancreas Pancrea
18 chr1:93307000-93316600 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr1:93307000-93324800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:93307200-93312200 Strong transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:93307200-93320000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:93307800-93316800 Weak transcription Fetal Lung lung
23 chr1:93308000-93323400 Weak transcription Small Intestine intestine
24 chr1:93308000-93324600 Weak transcription Psoas Muscle Psoas
25 chr1:93308400-93313400 Weak transcription Stomach Mucosa stomach
26 chr1:93309200-93317400 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:93309400-93324800 Weak transcription NHDF-Ad bronchial
28 chr1:93309600-93314000 Weak transcription Hela-S3 cervix
29 chr1:93309600-93324800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:93309800-93312000 Weak transcription HUVEC blood vessel
31 chr1:93309800-93312400 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:93309800-93313400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:93309800-93313400 Weak transcription Colonic Mucosa Colon
34 chr1:93309800-93313400 Weak transcription Esophagus oesophagus
35 chr1:93309800-93313400 Weak transcription NHEK skin
36 chr1:93309800-93314800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:93309800-93315000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr1:93309800-93315000 Weak transcription Thymus Thymus
39 chr1:93309800-93315400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr1:93309800-93317200 Weak transcription K562 blood
41 chr1:93309800-93317400 Weak transcription Ovary ovary
42 chr1:93309800-93317400 Weak transcription Rectal Smooth Muscle rectum
43 chr1:93309800-93317600 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr1:93309800-93318200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:93309800-93320000 Weak transcription Spleen Spleen
46 chr1:93309800-93324200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr1:93309800-93324400 Weak transcription A549 lung
48 chr1:93309800-93324400 Weak transcription Osteobl bone
49 chr1:93309800-93342400 Weak transcription NHLF lung
50 chr1:93310000-93311800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015