Variant report

Variant	rs2782766
Chromosome Location	chr1:71229332-71229333
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10157447	0.82[AMR][1000 genomes]
rs2257645	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2257759	1.00[ASN][1000 genomes]
rs2258812	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2258880	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2782790	0.81[AMR][1000 genomes]
rs2782791	1.00[AMR][1000 genomes]
rs2782796	1.00[AMR][1000 genomes]
rs2782803	0.82[CEU][hapmap]
rs2820517	1.00[AMR][1000 genomes]
rs2820544	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71221800-71230600	Weak transcription	K562	blood
2	chr1:71226600-71230200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:71227000-71229800	Weak transcription	NHDF-Ad	bronchial
4	chr1:71227000-71230800	Weak transcription	Osteobl	bone
5	chr1:71229200-71229400	ZNF genes & repeats	Aorta	Aorta
6	chr1:71229200-71230400	Enhancers	Primary hematopoietic stem cells short term culture	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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