Variant report

Variant	rs2782769
Chromosome Location	chr1:71219225-71219226
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:71216974..71219275-chr1:71222193..71224615,2	MCF-7	breast:
2	chr1:71217715..71220280-chr1:71509356..71511477,2	K562	blood:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10889891	0.88[ASN][1000 genomes]
rs10889892	0.83[ASN][1000 genomes]
rs11209705	0.86[ASN][1000 genomes]
rs11579908	0.86[ASN][1000 genomes]
rs11803673	0.88[ASN][1000 genomes]
rs11810467	0.86[ASN][1000 genomes]
rs12026456	0.86[ASN][1000 genomes]
rs12040186	1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12049445	0.86[ASN][1000 genomes]
rs12049500	0.99[ASN][1000 genomes]
rs1335002	0.97[ASN][1000 genomes]
rs1591386	0.99[ASN][1000 genomes]
rs17131473	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1889598	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs1932050	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2152121	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2152122	0.99[ASN][1000 genomes]
rs2152123	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2782768	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2782770	0.99[ASN][1000 genomes]
rs2782771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2782772	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2820540	0.92[ASN][1000 genomes]
rs2820541	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2820542	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs34087524	0.82[ASN][1000 genomes]
rs34745168	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs35615554	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4320734	0.90[ASN][1000 genomes]
rs55884889	1.00[AMR][1000 genomes]
rs74086786	0.87[ASN][1000 genomes]
rs915220	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71218600-71219400	Enhancers	Placenta Amnion	Placenta Amnion
2	chr1:71218800-71219400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:71218800-71221800	Enhancers	K562	blood

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