Variant report

Variant	rs2782770
Chromosome Location	chr1:71218867-71218868
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:71216974..71219275-chr1:71222193..71224615,2	MCF-7	breast:
2	chr1:71217715..71220280-chr1:71509356..71511477,2	K562	blood:
3	chr1:71217242..71219126-chr1:71224121..71226542,2	K562	blood:

rs_ID	r²[population]
rs10493478	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10889891	0.89[ASN][1000 genomes]
rs10889892	0.84[ASN][1000 genomes]
rs11209705	0.87[ASN][1000 genomes]
rs11579908	0.87[ASN][1000 genomes]
rs11803673	0.89[ASN][1000 genomes]
rs11810467	0.87[ASN][1000 genomes]
rs12023582	0.94[CHB][hapmap]
rs12026456	0.87[ASN][1000 genomes]
rs12040186	0.87[ASN][1000 genomes]
rs12041247	1.00[CHB][hapmap]
rs12048245	1.00[CHB][hapmap]
rs12048393	0.86[CEU][hapmap];1.00[CHB][hapmap];0.84[EUR][1000 genomes]
rs12049445	0.87[ASN][1000 genomes]
rs12049500	1.00[ASN][1000 genomes]
rs12127573	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12141116	0.89[CEU][hapmap];1.00[CHB][hapmap]
rs1335002	0.98[ASN][1000 genomes]
rs1591386	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17131473	0.93[CHB][hapmap];0.80[ASN][1000 genomes]
rs17131476	0.83[CHB][hapmap]
rs17131485	0.93[CHB][hapmap]
rs17131488	1.00[CHB][hapmap]
rs1889598	1.00[ASN][1000 genomes]
rs1932050	1.00[ASN][1000 genomes]
rs2068652	0.93[CHB][hapmap]
rs2152121	1.00[ASN][1000 genomes]
rs2152122	1.00[ASN][1000 genomes]
rs2152126	0.86[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap]
rs2782768	1.00[ASN][1000 genomes]
rs2782769	0.99[ASN][1000 genomes]
rs2782786	1.00[CHB][hapmap]
rs2782787	1.00[CHB][hapmap]
rs2782788	1.00[CHB][hapmap]
rs2820513	1.00[CHB][hapmap]
rs2820540	0.93[ASN][1000 genomes]
rs2820541	1.00[ASN][1000 genomes]
rs2820542	1.00[ASN][1000 genomes]
rs34087524	0.83[ASN][1000 genomes]
rs34745168	0.83[ASN][1000 genomes]
rs35615554	0.83[ASN][1000 genomes]
rs4320734	0.91[ASN][1000 genomes]
rs55884889	0.80[ASN][1000 genomes]
rs61778712	0.97[EUR][1000 genomes]
rs6684573	0.81[CHB][hapmap]
rs6685675	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs74086786	0.88[ASN][1000 genomes]
rs74086973	0.80[ASN][1000 genomes]
rs915220	1.00[ASN][1000 genomes]
rs950031	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71217800-71219200	Enhancers	Placenta	Placenta
2	chr1:71218200-71219000	Enhancers	Gastric	stomach
3	chr1:71218200-71219000	Enhancers	Pancreas	Pancrea
4	chr1:71218600-71219200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:71218600-71219400	Enhancers	Placenta Amnion	Placenta Amnion
6	chr1:71218800-71219400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:71218800-71221800	Enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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