Variant report

Variant	rs2789730
Chromosome Location	chr1:216925514-216925515
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12059942	0.87[EUR][1000 genomes]
rs1339350	0.90[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs1339357	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs2789732	0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2789733	0.91[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2813703	0.80[YRI][hapmap]
rs2820875	0.96[ASN][1000 genomes]
rs2820876	0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2820878	0.86[CEU][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2999504	0.86[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216897400-216958600	Weak transcription	Pancreas	Pancrea
2	chr1:216911600-216934200	Weak transcription	Psoas Muscle	Psoas
3	chr1:216922400-216931400	Weak transcription	Right Atrium	heart
4	chr1:216925000-216926200	Weak transcription	Fetal Heart	heart
5	chr1:216925200-216931800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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