Variant report

Variant rs2799512
Chromosome Location chr1:92309916-92309917
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92294800-92311600 Weak transcription Gastric stomach
2 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:92296800-92311400 Weak transcription Stomach Mucosa stomach
4 chr1:92297000-92310400 Weak transcription Pancreas Pancrea
5 chr1:92297000-92311000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:92297200-92311800 Weak transcription Fetal Intestine Large intestine
7 chr1:92297200-92313600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr1:92297800-92310400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:92298200-92314600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:92300000-92310200 Weak transcription Fetal Lung lung
11 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:92301000-92311000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:92302600-92310000 Weak transcription Fetal Heart heart
14 chr1:92302600-92310800 Weak transcription Stomach Smooth Muscle stomach
15 chr1:92304800-92311600 Weak transcription Right Atrium heart
16 chr1:92305800-92310400 Weak transcription Placenta Placenta
17 chr1:92306000-92314800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:92307000-92310200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:92307000-92310200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:92307000-92311000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:92307000-92311200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:92307200-92310000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:92307200-92310000 Weak transcription Osteobl bone
24 chr1:92308000-92313600 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr1:92308200-92310400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:92308200-92310400 Weak transcription Duodenum Mucosa Duodenum
27 chr1:92308200-92311200 Weak transcription K562 blood
28 chr1:92308200-92311400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr1:92308200-92317400 Weak transcription Lung lung
30 chr1:92308400-92310400 Weak transcription Adipose Nuclei Adipose
31 chr1:92308400-92311000 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:92308400-92311600 Enhancers Hela-S3 cervix
33 chr1:92308600-92310400 Weak transcription Colon Smooth Muscle Colon
34 chr1:92308600-92310400 Weak transcription Ovary ovary
35 chr1:92308600-92311000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:92308600-92311000 Weak transcription Small Intestine intestine
37 chr1:92308600-92311400 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr1:92308600-92316400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:92308800-92311000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:92309000-92310200 Weak transcription A549 lung
41 chr1:92309000-92310400 Enhancers NHEK skin
42 chr1:92309200-92310000 ZNF genes & repeats Fetal Muscle Leg muscle
43 chr1:92309200-92310200 Genic enhancers NHDF-Ad bronchial
44 chr1:92309200-92310600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:92309200-92312800 Enhancers NHLF lung
46 chr1:92309400-92310000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
47 chr1:92309400-92313200 Weak transcription Right Ventricle heart
48 chr1:92309600-92310200 ZNF genes & repeats Fetal Muscle Trunk muscle
49 chr1:92309600-92311000 Enhancers Muscle Satellite Cultured Cells --
50 chr1:92309600-92311600 Weak transcription Primary T cells fromperipheralblood blood

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