The 2.0 version of rSNPBase

Variant report

Variant rs2799514
Chromosome Location chr1:92321913-92321914
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:92312000-92329800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:92312000-92337200 Weak transcription Fetal Intestine Small intestine
5 chr1:92312600-92322200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:92312800-92325600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:92313800-92328200 Weak transcription Esophagus oesophagus
8 chr1:92315000-92329800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:92315200-92330200 Weak transcription Spleen Spleen
10 chr1:92316800-92325000 Weak transcription Primary T cells fromperipheralblood blood
11 chr1:92317000-92330000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:92317200-92329000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:92317400-92329200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:92317400-92329800 Weak transcription Fetal Kidney kidney
15 chr1:92317400-92337200 Weak transcription K562 blood
16 chr1:92317400-92338000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:92317400-92344400 Weak transcription Fetal Intestine Large intestine
18 chr1:92317600-92324600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:92317600-92325600 Weak transcription Liver Liver
20 chr1:92317600-92329200 Weak transcription Osteobl bone
21 chr1:92317600-92329600 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:92317600-92335800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:92317800-92326000 Weak transcription Fetal Muscle Trunk muscle
24 chr1:92318000-92326600 Weak transcription NHLF lung
25 chr1:92318000-92328800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:92318000-92328800 Weak transcription Fetal Lung lung
27 chr1:92318000-92336800 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:92318000-92337000 Weak transcription Small Intestine intestine
29 chr1:92318200-92329600 Weak transcription Left Ventricle heart
30 chr1:92319200-92327000 Strong transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:92319600-92322200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:92319600-92322200 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:92319800-92329000 Strong transcription NHDF-Ad bronchial
34 chr1:92319800-92330000 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:92320000-92324800 Weak transcription Fetal Stomach stomach
36 chr1:92320000-92326600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:92320000-92338000 Weak transcription Lung lung
38 chr1:92320400-92322000 Weak transcription Placenta Placenta
39 chr1:92320600-92322000 Weak transcription HepG2 liver
40 chr1:92320800-92322000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:92321000-92322000 Weak transcription Fetal Muscle Leg muscle
42 chr1:92321000-92322000 Weak transcription Ovary ovary
43 chr1:92321000-92322200 Weak transcription Colon Smooth Muscle Colon
44 chr1:92321000-92322400 Weak transcription Stomach Smooth Muscle stomach
45 chr1:92321000-92329800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:92321000-92329800 Weak transcription Pancreas Pancrea
47 chr1:92321000-92329800 Weak transcription Psoas Muscle Psoas
48 chr1:92321000-92332200 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:92321000-92332800 Weak transcription Right Ventricle heart
50 chr1:92321200-92322800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015