Variant report

Variant rs2799516
Chromosome Location chr1:92312764-92312765
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:92297200-92313600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:92298200-92314600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:92300800-92329600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:92306000-92314800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:92308000-92313600 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr1:92308200-92317400 Weak transcription Lung lung
8 chr1:92308600-92316400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:92309200-92312800 Enhancers NHLF lung
10 chr1:92309400-92313200 Weak transcription Right Ventricle heart
11 chr1:92309800-92313400 Weak transcription Esophagus oesophagus
12 chr1:92310000-92315000 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr1:92310200-92312800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:92310200-92312800 Enhancers Fetal Lung lung
15 chr1:92310200-92313600 Enhancers NHDF-Ad bronchial
16 chr1:92310200-92316000 Weak transcription Fetal Muscle Trunk muscle
17 chr1:92310400-92312800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:92310400-92312800 Enhancers Fetal Stomach stomach
19 chr1:92310400-92313000 Enhancers Fetal Muscle Leg muscle
20 chr1:92310400-92313400 Enhancers Ovary ovary
21 chr1:92310400-92313800 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr1:92310400-92313800 Enhancers Duodenum Mucosa Duodenum
23 chr1:92310800-92315800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr1:92311000-92312800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:92311000-92312800 Enhancers Rectal Smooth Muscle rectum
26 chr1:92311000-92313000 Enhancers Skeletal Muscle Female skeletal muscle
27 chr1:92311000-92316000 Weak transcription Aorta Aorta
28 chr1:92311600-92313600 Enhancers Primary T cells fromperipheralblood blood
29 chr1:92311800-92316400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:92312000-92313000 Enhancers Colon Smooth Muscle Colon
31 chr1:92312000-92313600 Enhancers Liver Liver
32 chr1:92312000-92313800 Enhancers Duodenum Smooth Muscle Duodenum
33 chr1:92312000-92314000 Enhancers Fetal Heart heart
34 chr1:92312000-92314000 Enhancers Stomach Smooth Muscle stomach
35 chr1:92312000-92314800 Weak transcription Spleen Spleen
36 chr1:92312000-92315400 Enhancers HepG2 liver
37 chr1:92312000-92316000 Weak transcription HUVEC blood vessel
38 chr1:92312000-92316400 Weak transcription Fetal Kidney kidney
39 chr1:92312000-92316600 Weak transcription HSMM muscle
40 chr1:92312000-92316800 Weak transcription NH-A brain
41 chr1:92312000-92316800 Weak transcription NHEK skin
42 chr1:92312000-92317000 Weak transcription Gastric stomach
43 chr1:92312000-92329800 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:92312000-92337200 Weak transcription Fetal Intestine Small intestine
45 chr1:92312200-92312800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:92312200-92312800 Enhancers A549 lung
47 chr1:92312200-92313200 Weak transcription Left Ventricle heart
48 chr1:92312200-92313200 Weak transcription Pancreas Pancrea
49 chr1:92312200-92313400 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:92312200-92313400 Weak transcription Right Atrium heart

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