The 2.0 version of rSNPBase

Variant report

Variant rs2799528
Chromosome Location chr1:92333934-92333935
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92296400-92335800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:92312000-92337200 Weak transcription Fetal Intestine Small intestine
3 chr1:92317400-92337200 Weak transcription K562 blood
4 chr1:92317400-92338000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:92317400-92344400 Weak transcription Fetal Intestine Large intestine
6 chr1:92317600-92335800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr1:92318000-92336800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:92318000-92337000 Weak transcription Small Intestine intestine
9 chr1:92320000-92338000 Weak transcription Lung lung
10 chr1:92321800-92336800 Weak transcription Right Atrium heart
11 chr1:92325200-92335800 Weak transcription Fetal Heart heart
12 chr1:92326400-92335800 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:92327200-92335000 Weak transcription Fetal Muscle Trunk muscle
14 chr1:92330000-92335800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:92330200-92334200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:92330400-92335800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:92330400-92335800 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:92330400-92336800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:92330400-92337000 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:92330400-92337600 Weak transcription Fetal Kidney kidney
21 chr1:92330400-92337800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:92330600-92334000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr1:92330600-92335800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:92330600-92335800 Weak transcription GM12878-XiMat blood
25 chr1:92330600-92336200 Weak transcription Fetal Thymus thymus
26 chr1:92330600-92337000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:92330600-92337200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:92330600-92337400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:92330800-92338000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:92330800-92338000 Weak transcription Fetal Muscle Leg muscle
31 chr1:92331600-92337800 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:92331800-92334000 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr1:92331800-92334000 Weak transcription NHDF-Ad bronchial
34 chr1:92332200-92334200 Enhancers Ovary ovary
35 chr1:92332200-92335000 Genic enhancers HepG2 liver
36 chr1:92332400-92334400 Enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr1:92332400-92335800 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:92332400-92342400 Enhancers Primary T cells fromperipheralblood blood
39 chr1:92332600-92335600 Weak transcription Fetal Lung lung
40 chr1:92332800-92334400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:92332800-92337200 Weak transcription NHEK skin
42 chr1:92333000-92334400 Weak transcription Spleen Spleen
43 chr1:92333000-92335000 Weak transcription Stomach Smooth Muscle stomach
44 chr1:92333000-92336800 Weak transcription Pancreas Pancrea
45 chr1:92333000-92337200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:92333000-92337200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr1:92333200-92334000 Weak transcription Fetal Stomach stomach
48 chr1:92333200-92334200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:92333200-92336000 Weak transcription Adipose Nuclei Adipose
50 chr1:92333200-92336800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015