Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:224944665..224946199-chr1:224947747..224949532,2	K562	blood:

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1436166	0.83[AMR][1000 genomes]
rs1436174	0.87[ASN][1000 genomes]
rs1436176	0.88[CHB][hapmap];0.81[ASN][1000 genomes]
rs1898190	0.81[ASN][1000 genomes]
rs1898191	0.81[ASN][1000 genomes]
rs2016652	0.86[AMR][1000 genomes]
rs2574874	0.83[AMR][1000 genomes]
rs2574877	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2574878	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2574881	0.84[ASN][1000 genomes]
rs2662906	0.88[AMR][1000 genomes]
rs2662907	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2662917	0.83[CHB][hapmap];0.83[ASN][1000 genomes]
rs2662922	0.83[ASN][1000 genomes]
rs2662924	0.83[AMR][1000 genomes]
rs2662925	0.88[AMR][1000 genomes]
rs2662927	0.83[AMR][1000 genomes]
rs2802552	0.81[CHB][hapmap];0.85[AMR][1000 genomes]
rs2802556	0.85[AMR][1000 genomes]
rs2802558	0.86[AMR][1000 genomes]
rs2802559	0.83[AMR][1000 genomes]
rs2802562	1.00[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2802563	0.82[AMR][1000 genomes]
rs2802730	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2802740	0.84[ASN][1000 genomes]
rs2802741	0.81[ASN][1000 genomes]
rs2802742	0.81[ASN][1000 genomes]
rs2802747	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2997499	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs3012182	0.81[CHB][hapmap];0.80[TSI][hapmap];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3012183	0.84[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs3012184	0.91[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524125	chr1:224902054-225021860	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:224944800-224954800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:224947200-224950400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr1:224947200-224951400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr1:224948000-224956800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr1:224948400-224949200	Weak transcription	Stomach Smooth Muscle	stomach
6	chr1:224948400-224949800	Enhancers	Liver	Liver
7	chr1:224948600-224949600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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