Variant report

Variant	rs2802732
Chromosome Location	chr1:225060249-225060250
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10495228	0.81[JPT][hapmap]
rs10495229	0.80[JPT][hapmap]
rs12097622	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12561993	0.81[JPT][hapmap]
rs12563857	0.81[JPT][hapmap]
rs12566857	0.81[JPT][hapmap]
rs12567091	0.81[JPT][hapmap]
rs1316512	0.82[EUR][1000 genomes]
rs1361923	0.82[EUR][1000 genomes]
rs1395116	0.81[ASN][1000 genomes]
rs1482279	0.81[JPT][hapmap]
rs1506070	0.81[JPT][hapmap]
rs1506071	0.80[CHD][hapmap]
rs1506073	0.81[ASN][1000 genomes]
rs16856396	0.96[EUR][1000 genomes]
rs16856435	0.96[EUR][1000 genomes]
rs16856463	0.96[EUR][1000 genomes]
rs16856829	0.96[EUR][1000 genomes]
rs16858661	0.81[JPT][hapmap]
rs16858758	0.81[JPT][hapmap]
rs16858829	0.81[JPT][hapmap]
rs1892121	0.82[EUR][1000 genomes]
rs1936632	0.82[EUR][1000 genomes]
rs1982707	0.81[JPT][hapmap]
rs2051158	0.82[ASN][1000 genomes]
rs2128268	0.80[CHD][hapmap]
rs2128269	0.83[ASN][1000 genomes]
rs2244102	0.83[ASN][1000 genomes]
rs2244126	0.83[ASN][1000 genomes]
rs2298257	0.89[CEU][hapmap];0.93[JPT][hapmap];0.96[EUR][1000 genomes]
rs2449259	0.81[JPT][hapmap]
rs2449273	0.81[JPT][hapmap]
rs2449274	0.81[JPT][hapmap]
rs2449276	0.81[JPT][hapmap]
rs2449292	0.81[JPT][hapmap]
rs2449303	0.81[ASN][1000 genomes]
rs2449307	0.83[ASN][1000 genomes]
rs2449308	0.81[ASN][1000 genomes]
rs2449311	0.81[JPT][hapmap]
rs2456328	0.80[ASN][1000 genomes]
rs2456335	0.81[JPT][hapmap]
rs2456339	0.81[JPT][hapmap]
rs2456340	0.80[JPT][hapmap]
rs2456349	0.81[CHB][hapmap]
rs2456351	0.81[ASN][1000 genomes]
rs2489322	0.81[JPT][hapmap]
rs2489327	0.80[CHD][hapmap]
rs2489348	0.80[CHD][hapmap]
rs2489352	0.80[CHD][hapmap]
rs2501064	0.81[JPT][hapmap]
rs2501066	0.81[JPT][hapmap]
rs2501072	0.81[JPT][hapmap]
rs2501078	0.84[JPT][hapmap]
rs2501086	0.81[ASN][1000 genomes]
rs2501107	0.81[CHB][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs2501108	0.81[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs2501114	0.81[JPT][hapmap]
rs2501129	0.81[JPT][hapmap]
rs2501130	0.81[JPT][hapmap]
rs2501141	0.81[JPT][hapmap]
rs2501156	0.81[JPT][hapmap]
rs2662929	0.82[EUR][1000 genomes]
rs2800234	0.84[AMR][1000 genomes]
rs2802552	0.87[CEU][hapmap];0.81[JPT][hapmap]
rs2802568	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2802733	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2997478	0.82[EUR][1000 genomes]
rs3012182	0.89[CEU][hapmap];0.81[JPT][hapmap]
rs4587536	0.96[EUR][1000 genomes]
rs55752315	0.96[EUR][1000 genomes]
rs56237431	0.93[EUR][1000 genomes]
rs61540517	0.96[EUR][1000 genomes]
rs6697156	0.81[JPT][hapmap]
rs7531542	0.81[JPT][hapmap]
rs981067	0.81[CHB][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225056400-225063200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr1:225056800-225060800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr1:225060200-225061200	Enhancers	Liver	Liver
4	chr1:225060200-225061400	Enhancers	Pancreas	Pancrea
5	chr1:225060200-225061600	Enhancers	Fetal Brain Male	brain
6	chr1:225060200-225063800	Enhancers	Fetal Lung	lung
7	chr1:225060200-225064200	Enhancers	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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